Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3116 atggagAGAAAGGCTCTGGTGGTGTGCTGCGTTGTGGGCTTCTTGGGGCTGTTGTCGGCTGCAACTAGCTTCGGTGCAGAAGCAACAAGGATTAagGGTCTAGTGCTTGTGGTTGGCACAGTTGAGAGGGGTTCTCAAATTCATTTTGTTACACCAAATCAGTGCACGTATCCTCGAAGTCCAGCTCTGCCTCTCGGTTTAACTGCAGCACTGGCTCTTATGCTATCTCAAATAGTCATAAATGTTGCAACTGGGTGTGTTTGTTGCAGAAAAAATTCCCAAATCCAGGAGTCCAACTGGAAGGTGGCACTGGTCTGCTTTGTTTTATCCTGGTTCACATTTGTAATCGCTTTTCTCCTGTTGCTAACTGGTGCTGCGCTGAATGATCAACGTGGTGAAGAGAGTCAATACTTTGGCTACTACTACTGCTATGTTGTGAAACCTGGAGTTTTCGCGGGAGGCGCAATTTTATCCCTTGCAAGTGTTGCATTTGGAATTGTGTATTACATTTCCTTAACTGAAGGAAAGAATGGTAGCCAATACCCATATCCTAATCAAGGGGTCATAGCCATGGCACAACCACAGATCCCATCTCAGACTACTCAAGAACCCGTGTTTGTGCATGAAGACACATACATCAGACGACAGTTCACATGA 657 0.4521 MERKALVVCCVVGFLGLLSAATSFGAEATRIKGLVLVVGTVERGSQIHFVTPNQCTYPRSPALPLGLTAALALMLSQIVINVATGCVCCRKNSQIQESNWKVALVCFVLSWFTFVIAFLLLLTGAALNDQRGEESQYFGYYYCYVVKPGVFAGGAILSLASVAFGIVYYISLTEGKNGSQYPYPNQGVIAMAQPQIPSQTTQEPVFVHEDTYIRRQFT 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3116 218 Pfam Protein of unknown function (DUF1218) 69 163 IPR009606 -
Ssu3g3116 218 PANTHER PROTEIN, PUTATIVE (DUF1218)-RELATED 1 204 - -
Ssu3g3116 218 PANTHER OS07G0462200 PROTEIN-RELATED 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3116 Ssu-Chr3 87075558 87078192 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3116 - - gmx:100787046 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3116 3 87075558 87078192 Ssu3g3116 3 87075558 87078192 ECH