Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3115 atggAGGACGCATCAGCATCAAAGTTCATTCCACACCAAATCGGAGGGGTCCAAAACGATGCGCTTCGTTTCGGACTCCATGGAGTCAAGAGCGACATTGTTGGTTCTCACCCTGTCCAGTCTTCCCTCCAATCTACGAGGAGGATGGAAGAAGCAATGAAGAGGCAATGCAAAGTCAATTTGTATGGAACTGCTTTTCCACTGAAGGAGGACCTTGACAGGCAAATACTGTCACGGTTCCAGCGGCCTCCTGGACCAATTCCTTCTTCAATGCTGGGTTTGGAGACTGTTACAGGAAGTGTTGATCACTTTGGTTTTGAGGATTGTCTAAATGACCCACGCGAATCAGAGACTTTCCGACCATTGGACATGCATCATGGGATGGAAGTTCGCCTTGGTCTATCTAAGGGACCAGTGTACCCaagtattatataa 435 0.469 MEDASASKFIPHQIGGVQNDALRFGLHGVKSDIVGSHPVQSSLQSTRRMEEAMKRQCKVNLYGTAFPLKEDLDRQILSRFQRPPGPIPSSMLGLETVTGSVDHFGFEDCLNDPRESETFRPLDMHHGMEVRLGLSKGPVYPSII 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3115 144 PANTHER BNAA07G25120D PROTEIN 6 144 - -
Ssu3g3115 144 Pfam Proteasome maturation factor UMP1 17 132 IPR008012 GO:0043248
Ssu3g3115 144 PANTHER PROTEASOME MATURATION PROTEIN UMP1 6 144 IPR008012 GO:0043248
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3115 Ssu-Chr3 87070314 87072532 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3115 K11599 - gmx:100500555 291.197