Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3110 ATGGATCTTAGCTTGGCTAATAATTCTTCTCCGCCTCGTCCCAGATGGAGAAAAGTAGCATATGGTGGTATGCAACCTGGTTATGATGATAATCACACTGATGAATCTTTCCTTGAAGGAATGGTCATGAATGCCAGTGTTGTAAAAAGGGGCATGCTGAAGGTGATGCTGGACTCGGTTTCCATTTCTGAATATTTGTGCATTGTTGCTCTTGTTGTCTTGGTCTGGACTTGTACACTTACATCAACTATTGATGAAAATTCTCTCCTATTTATTGATGTGAGTCTTCTTGTTTCAGGTTTTTTAATACTCCTTTTTACTCAAGAAATGCTTTCCCTTAGCCTTCTCCTCCATTATTTccttaatatctcttttttcatAACCGTGTTATATGTTTTGGCTCCCATCTATCAAACTCTCACAAGGTCCATTAGTTCGGATTCCATTTGGGCAGTAGCTGTATCACTTCTTGTACTTCACCTTTTTCTGCACGACTATTCAGAATCCACCGTCAAAGCCCCGGGGGTTCTGAAGAATCCTGCGTTGACCAGTTGTATCTCTGTAAATGCTTCCGTAGTCGcctctgtttttatttcttctcgCCTTCCATCAAGACTACAAGTGTTCGCTATCATGTTATTCTCATTGCAGGTTTTCCTTTTTGCTCCACTGGTTACTTactgtattaaaaaatattccttcCGCTTGCACCTATGCTTTTCTGTCAGTTTGATGGCCATGACCTTAAGTTTTGTGTACATGCTGCATCGCCTTCTTTTTGTGCTGCTGCTTAGTTTGTTGGTTTTTGTCAACGTGGTCTGCCCTTATTGGCTTATAAGGATTCAGGAGTACAAGTTTGAGATCAATGGACCTTGGGATGAGGCTAAACTTTGTTTTGATATTACAGACTGA 912 0.3838 MDLSLANNSSPPRPRWRKVAYGGMQPGYDDNHTDESFLEGMVMNASVVKRGMLKVMLDSVSISEYLCIVALVVLVWTCTLTSTIDENSLLFIDVSLLVSGFLILLFTQEMLSLSLLLHYFLNISFFITVLYVLAPIYQTLTRSISSDSIWAVAVSLLVLHLFLHDYSESTVKAPGVLKNPALTSCISVNASVVASVFISSRLPSRLQVFAIMLFSLQVFLFAPLVTYCIKKYSFRLHLCFSVSLMAMTLSFVYMLHRLLFVLLLSLLVFVNVVCPYWLIRIQEYKFEINGPWDEAKLCFDITD 303
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3110 303 PIRSF PIG-C 3 303 IPR009450 GO:0006506|GO:0016021
Ssu3g3110 303 Pfam Phosphatidylinositol N-acetylglucosaminyltransferase 16 293 IPR009450 GO:0006506|GO:0016021
Ssu3g3110 303 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT C 9 302 - -
Ssu3g3110 303 PANTHER PHOSPHATIDYLINOSITOL GLYCAN, CLASS C 9 302 IPR009450 GO:0006506|GO:0016021
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3110 1 303 Lipid Metabolism Gene Families AT2G34980 77.303 1.53e-138 392
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3110 K03859 - gmx:100796558 525.783