Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3103 ATGTCGATCGCTTTCTCCTTCTTCACTCCTCCCTCTTCCCTTTCTCCCTCCAAATCCGTTCCCTCCTTCTCCCTCTCTCCGCCCTCCCTCCGTCTCCGCCTCCCCCTCCCTCCCCTCCGCCGCCCCACAGATCGCCCTTTCAGTCTCCGCTCCACCGGCGGAGGCGTTGGCGGCGGATATTTCGGAGGTCACGGCGGCGGCGGTCATGGAGGAGGCGGCGGCGGCGACGAGGACTTCAATGAGAGAAAGAACGAGGCGAttatggtggtggcggcggcgggGAGGTCGTTGGAGAGCGTGCCGGCGGACTTGGCCGCGGCGATAAAGGAGGGGAAGATTCCGGCGGCGGTGGTGACTCGGTTTCTGGAGCTGGAGAAGTCCGCGTTCTTCCGGTGGCTGCTTCAGTATGCCGGGTTCAGGGAGCGTCTCCTCGCCGATGATCTCTTCCTCGCCAAGGTTGCCATGGAATGCGGCGTTGGCGTCTTCACCAAgACTGCTGCTGAGTATGACCGCAGGAGAGAAAACTTTTTCAAGGAGATCGAAATTGTCTTCGCTGATGTGGTGATGGCCATAATTGCAGATTTCATGTTGGTTTACCTTCCTGCACCTACTGTAGCGCTTAGACCACCACTCACACTCGGGGCAGGGCCTATTGCTAAGTTTTTCCATGGCTGCCCAGATAATGCTTTTCAGGTTGCTCTCTCTGGAACATCATATTCCTTGTTACAGAGGGTTGGTGCTATGGTGCGTAATGGGACTAAGCTTTTTGCAGTTGGAACTGCTTCATCATTGGTTGGTACAGCTGTGACAAATGCCTTGATTAATGCAAAGAAGGCGGTTGATAAGTCTTCTGATGTGGAAATTGAAAATGTTCCCATATTGTCTACCAGTGCTGCCTATGGTGTCTATATGGCAGTTTCTAGCAACCTCAGGTATCAAGTACTTGCTGGAATTATTGAGCAGAGAATTTTGGAACCTTTACTGCACCAGCACAAGCTCATGCTTAGTGCAATTTGTTTTGCTGTGCGGACTGGCAATACATATTTGGGTTCATTATTGTGGGTGGATTATGCTCGTTGGGTAGGGGTTCAGTAG 1095 0.5178 MSIAFSFFTPPSSLSPSKSVPSFSLSPPSLRLRLPLPPLRRPTDRPFSLRSTGGGVGGGYFGGHGGGGHGGGGGGDEDFNERKNEAIMVVAAAGRSLESVPADLAAAIKEGKIPAAVVTRFLELEKSAFFRWLLQYAGFRERLLADDLFLAKVAMECGVGVFTKTAAEYDRRRENFFKEIEIVFADVVMAIIADFMLVYLPAPTVALRPPLTLGAGPIAKFFHGCPDNAFQVALSGTSYSLLQRVGAMVRNGTKLFAVGTASSLVGTAVTNALINAKKAVDKSSDVEIENVPILSTSAAYGVYMAVSSNLRYQVLAGIIEQRILEPLLHQHKLMLSAICFAVRTGNTYLGSLLWVDYARWVGVQ 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3103 364 Pfam Protein RETICULATA-related 141 318 IPR021825 -
Ssu3g3103 364 PANTHER PROTEIN RETICULATA-RELATED 4, CHLOROPLASTIC 58 364 - -
Ssu3g3103 364 MobiDBLite consensus disorder prediction 1 28 - -
Ssu3g3103 364 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 58 364 - -
Ssu3g3103 364 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3103 Ssu-Chr3 86878081 86881288 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3103 - - gmx:100796187 519.62