Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3102 atggctgACATGATAACTCGACCCCAAACTATATCCTTATTGACCAAGATAGCTTCGTTTAAGCTTTCATGGTTCTGCAAAGGTGAGCAAAGTGATCAGCACAAACATGACATTGTCTCTTTTGAAAGAGGAAATATAACCACTGCAGAGCGGAGTAGTAAGCAGATTTCTTTGAAGTGGGAGTCATGCCCACAGACAGTGCTCTTATTGACCAAACCAAATTCAGTTTCAGTTCAAATTCTGTGTGCAGAAATGATTAGATGGTTGAGGCAGCAAAAGAAACTACACATCTATGTGGAACCACGCGTCAGGGTGGAACTTTTGACAGAATCGTCATACTTTAACTTTGTAGAAACTTGGAATGATGatGAGGAAGTTTTGATGCTGCACACTAAAGTTGATCTCGTGGTAACTCTTGGTGGCGATGGCACTGTCCTATGGGCAGCATCTATGTTCAAAGGGCCAGTGCCTCCTATTGTCCCCTTTTCTTTAGGGTCTCTTGGCTTTATGACCCCTTTCTATAGCGAACATTACAAAGAATGccttgaatcaattttaaaGGGTCCCATTAGTATCACATTACGGCACCGTTTACTATGTCATGTTATACGAGAAGCAGctaaaaatgaatatgaaaCTGAAGAACCTATGCTTGTTCTAAATGAGGTTACAATTGATCGTGGAATATCTTCTTTCCTCACAAATTTGGAATGCTACTGTGACGACTCCTTTGTCACATGTGTGCAAGGGGATGGATTAATCTTATCTACAACGTCTGGCAGTACAGCATATTCTTTAGCAGCTGGAGGATCAATGGTCCATCCGCAGGTTCCAGGTATTTTATTCACACCAATTTGCCCACATTCTCTATCTTTTAGGCCATTGATATTTCCGGAGCATGTCACTTTGCGGGTGCAAGTACCATTCAACAGCAGAAGCCCTGCATGGGCATCATTTGACGGCAAGGACAGGAAGCAGCTAGAACCTGGAGATGCACTAGTGTGTAGCATGGCTCCCTGGCCTGTTCCTACAGCTTGTCTGGTTGATTCTACTAATGACTTCTTGCGCAGTATTCATGAGGGCCTCCATTGGAATTTGAGAAAGACACAATCATTTGATGGCCCCCGGGAAACATGA 1137 0.4204 MADMITRPQTISLLTKIASFKLSWFCKGEQSDQHKHDIVSFERGNITTAERSSKQISLKWESCPQTVLLLTKPNSVSVQILCAEMIRWLRQQKKLHIYVEPRVRVELLTESSYFNFVETWNDDEEVLMLHTKVDLVVTLGGDGTVLWAASMFKGPVPPIVPFSLGSLGFMTPFYSEHYKECLESILKGPISITLRHRLLCHVIREAAKNEYETEEPMLVLNEVTIDRGISSFLTNLECYCDDSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLIFPEHVTLRVQVPFNSRSPAWASFDGKDRKQLEPGDALVCSMAPWPVPTACLVDSTNDFLRSIHEGLHWNLRKTQSFDGPRET 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3102 378 Pfam ATP-NAD kinase C-terminal domain 220 337 - -
Ssu3g3102 378 Gene3D - 54 365 IPR017438 -
Ssu3g3102 378 PANTHER NAD KINASE 1-RELATED 12 378 - -
Ssu3g3102 378 Pfam ATP-NAD kinase N-terminal domain 67 188 IPR002504 GO:0003951|GO:0006741
Ssu3g3102 378 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 66 370 IPR016064 -
Ssu3g3102 378 PANTHER NAD KINASE 12 378 - -
Ssu3g3102 378 Hamap NAD kinase [nadK]. 65 364 IPR002504 GO:0003951|GO:0006741
Ssu3g3102 378 Gene3D - 197 340 IPR017437 GO:0003951|GO:0019674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3102 Ssu-Chr3 86859692 86870278 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3102 K00858 - gmx:100813625 712.22