Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3101 ATGGACACAGTGAGGCCTGTTATTTCTGGGCCTCAAGAAAGCCAACCCATTGGGTTGTATGCTAGTATAGTACAAGTTTATTATTCTCAAGTTTCACTTTCTTCTGTTCGATACACCTTTCCATTCCTTATCGGAGCCACCCTCACTTTCCGATTCATTCTCACCGTTACACCCTACCCTACCATGGATAGCCTCCAAGCCACTTACAAAGacgaagaagatgaagaagacgACGCGCCACCCCCAACCACCGCTGGAGCCACCGACACCGAATCACCGGACGCTCCTCCCGCCGCCACCAGCACCCCCTCCGACACCCCGACCGAACCCCCGAACGACGTCCGATCGGAGCCCGACCCCTCCGACGACCTCTCCGACGACGAAGCCGCCTCCGACGGCTCCAAGAAGTCGCCGAAATCCGGCCGCGAAGAAGGCGACGCCTCCGACGAGGATCCGCCGCCGAAGAAGCAGAAGCCGCTCTCCTCTCTGACGGCGGCGAAGGAGAATTCGCCGGCATTGCCGGagtgcaacaacaacaataacaacgcGGCGACTCCGGCGACGGCGAACGGAACGGCGCCGAAGAAAtcgaagaagaagaacaacaacGTGTGGGCGACGAAGTCGACGCGGAAGGGGAAGAAGAAGACGAAgggaaacaacaacaacaacaacaacagcagcaacaacaaccaCCACAACGGGGAAGACAACGTGCTGATAACTCCGGTGCCGCGGTTCCCGGACAAGAGCGACGACACGGCGGAGATGAAGATTTGCTTGTCGAAGGTGTACAAAGCGGAGAAGGTTGAATTGAGCGAGGACAGAATGAGCGCGGGGAGCACGAAGGGTTACAGAATGGTGAGGGCGACGAGAGGGGTTGTGGAAGGCGCGTGGTACTTTGAGATTAGGGTTGTTAAATTGGGGGAGAGTGGGCACACGCGCCTTGGGTGGTCCACTGAGAAGGGTGATTTGCAGGCGCCGGTTGGGTACGATGGGAATAGTTTTGGGTATAGGGATATTGATGGGAGTAAGATACACAAGGCGCTTAGGGACAAGTATGGGGAGGAAGGGTACAAGGAAGGGGATGTTATTGGTTTCTATATCAATTTGCCTGATGGGGAAAAGTATGCCCCCAAAGCGCCCCATTTGGTGTGGTATAAGGGGCAGCGATATGTTTGTGCTCAAGATGCTAAGGAAGATCCGCCCGAAGTAGTGCCTGGAAGTGAGATATCATTCTTTAAAAATGGCATATGCCAAGGTGTAGCTTTCAAGGATCTTCATGGTGGTCGTTATTATCCTGCTGCTTCAATGTTTACTCTCCCCAATGAACCAAACTGCACGGTCAAGTTCAACTTTGGTCCTGACTTTGAATGTTTTCCTGAGGATTTCAATGAACGGCCTATTCCCAGGCCAATGATTGAAGTTCCTTATCATGGTTTTGACAATCGAGTTGAAAATGGAGAGTCTAATGAGAAGAAATCCTAG 1488 0.496 MDTVRPVISGPQESQPIGLYASIVQVYYSQVSLSSVRYTFPFLIGATLTFRFILTVTPYPTMDSLQATYKDEEDEEDDAPPPTTAGATDTESPDAPPAATSTPSDTPTEPPNDVRSEPDPSDDLSDDEAASDGSKKSPKSGREEGDASDEDPPPKKQKPLSSLTAAKENSPALPECNNNNNNAATPATANGTAPKKSKKKNNNVWATKSTRKGKKKTKGNNNNNNNSSNNNHHNGEDNVLITPVPRFPDKSDDTAEMKICLSKVYKAEKVELSEDRMSAGSTKGYRMVRATRGVVEGAWYFEIRVVKLGESGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKIHKALRDKYGEEGYKEGDVIGFYINLPDGEKYAPKAPHLVWYKGQRYVCAQDAKEDPPEVVPGSEISFFKNGICQGVAFKDLHGGRYYPAASMFTLPNEPNCTVKFNFGPDFECFPEDFNERPIPRPMIEVPYHGFDNRVENGESNEKKS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3101 495 MobiDBLite consensus disorder prediction 128 156 - -
Ssu3g3101 495 CDD SPRY_Ash2 270 457 - -
Ssu3g3101 495 Gene3D - 257 471 IPR043136 -
Ssu3g3101 495 SUPERFAMILY Concanavalin A-like lectins/glucanases 259 461 IPR013320 -
Ssu3g3101 495 Pfam SPRY domain 299 375 IPR003877 GO:0005515
Ssu3g3101 495 MobiDBLite consensus disorder prediction 219 237 - -
Ssu3g3101 495 MobiDBLite consensus disorder prediction 162 208 - -
Ssu3g3101 495 MobiDBLite consensus disorder prediction 85 111 - -
Ssu3g3101 495 ProSiteProfiles B30.2/SPRY domain profile. 239 458 IPR001870 -
Ssu3g3101 495 MobiDBLite consensus disorder prediction 69 241 - -
Ssu3g3101 495 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 92 479 IPR037353 GO:0048188|GO:0051568
Ssu3g3101 495 SMART SPRY_3 296 457 IPR003877 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3101 K14964 - gmx:100816796 659.448