Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3097 atgtttttggcAAGACCCATTTTCCGAGGACCCTCCCTTTGGGCTTTGCACTCTTCCTACGCATATTCCTCTTCCTCAGCAGCTGCAATTCAAGCTGAGAGAACCATCAAAGAAGGCTCCAGAAACGATTGGACCCGAGACGAAGTCAAATCCATCTATGACTCTCCCATTCTCGATCTTCTCTTCCACGGGGCTCAAGTTCACAGACATGCTCATAACTTCAGGGAAGTGCAGCAGTGTACTCTTCTGTCCATCAAAACAGGAGGGTGCAGTGAAGATTGTTCCTATTGTCCTCAATCCTCTAAGTATGATACAGGAATCAAAGGCCAACGGCTTATGAACAAGGAAGCTGTTCTCCATGCTGCAAAGAAGGCAAAAGAGGCTGGGAGCACTCGTTTTTGTATGGGTGCTGCGTGGAGGGACACACTAGGAAGAAAGACTAACTTCAACCAGATCCTTGAATATGTGAAAGACATAAGGGATATGGGGATGGAGGTGTGTTGCACCCTTGGCATGCTGGAGAAACAGCAGGCTGTTGAACTCAAGAAGGCAGGTCTCACTGCCTATAATCACAATCTTGACACATCAAGGGAATATTATCCAAACATCATCACAACAAGGACTTATGATGAGCGTCTAAAAACCCTTGAGTTTGTTCGTGATGCAGGGATCAATGTTTGTTCTGGAGGAATTATAGGGCTTGGAGAAGCAGAGGAGGACCGTGTAGGTTTGTTACATACATTGTCAACACTTCCCACCCATCCAGAGAGTGTTCCTATTAATGCACTTGTTGCGGTAAAGGGAACCCCTCTTGAGGATCAGAAGCCTGTTGAAATATGGGAGATGATTCGCATGATAGCCTCAGCGCGTATCATAATGCCAAAAGCAATGGTCAGGTTATCAGCTGGCAGAGTTCGGTTCTCCATGCCGGAGCAGGCATTGTGCTTTCTTGCTGGTGCAAATTCTATATTCACTGGTGAAAAGCTTCTCACTACTCCTAACAATGATTTTGATGCTGATCAACTCATGTTTAAAGTTCTTGGACTTCTCCCAAAAGCTCCAAGCTTACATGAAGGTGAAACTAGTGAGACAGAAGATTATAAGGAAGCTGCTTCTAGTTGA 1122 0.4501 MFLARPIFRGPSLWALHSSYAYSSSSAAAIQAERTIKEGSRNDWTRDEVKSIYDSPILDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCSEDCSYCPQSSKYDTGIKGQRLMNKEAVLHAAKKAKEAGSTRFCMGAAWRDTLGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKQQAVELKKAGLTAYNHNLDTSREYYPNIITTRTYDERLKTLEFVRDAGINVCSGGIIGLGEAEEDRVGLLHTLSTLPTHPESVPINALVAVKGTPLEDQKPVEIWEMIRMIASARIIMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKVLGLLPKAPSLHEGETSETEDYKEAASS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3097 373 SFLD BATS domain containing 37 355 - -
Ssu3g3097 373 SFLD biotin synthase 37 355 IPR024177 -
Ssu3g3097 373 ProSiteProfiles Radical SAM core domain profile. 75 304 IPR007197 GO:0003824|GO:0051536
Ssu3g3097 373 SUPERFAMILY Radical SAM enzymes 42 351 - -
Ssu3g3097 373 Pfam Radical SAM superfamily 87 245 IPR007197 GO:0003824|GO:0051536
Ssu3g3097 373 PIRSF Biotin_synth 24 358 IPR024177 -
Ssu3g3097 373 SMART MiaB 80 288 IPR006638 GO:0003824|GO:0051536
Ssu3g3097 373 SMART BATS_2 259 351 IPR010722 -
Ssu3g3097 373 CDD Radical_SAM 87 287 - -
Ssu3g3097 373 Gene3D Aldolase class I 41 353 IPR013785 -
Ssu3g3097 373 Hamap Biotin synthase [bioB]. 42 352 IPR002684 GO:0004076|GO:0009102
Ssu3g3097 373 Pfam Biotin and Thiamin Synthesis associated domain 259 349 IPR010722 -
Ssu3g3097 373 PANTHER BIOTIN SYNTHASE 20 368 IPR002684 GO:0004076|GO:0009102
Ssu3g3097 373 TIGRFAM bioB: biotin synthase 52 349 IPR002684 GO:0004076|GO:0009102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3097 K01012 - gmx:100808225 694.115