Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3083 ATGGGGAGAGTGGCTGTGGGAGTGGCGGTGGGTGCGGCGGTGGCGGCGTGCGCGGTGGCGGCGGTGGTGGTGGGGCGGAGAATGAGGAACAGGGGGAAGTGGAAGAGAGTGGTGAGGGTGTTGAGGGAGGTTGAGGAAGGGTGTGAGACTTCGGTTGGGAGGCTGAGGCAGGTGGTGGATGCTATGGCTGTTGAGATGCACGCTGGGTTGGCATCGGAAGGTGGttctaagctcaaaatgctTCTCACCTATGTTCACAATCTCCCTAATGGGACTGAGACAGGAACATATTATGCACTAGATCTTGGGGGTACAAATTTTAGGGTTTTGCGGGTTCATTTACATGGTCAACAATCTTCTGTCTTGGAACATGAAGTAGAGCGACAGCCCATTCCTCAACATCTAATGACGAGCACAAGCGAGGATCTCTTTGATTTCATTGCTTCTTCATTAAAGGAATTcattgagaaagaaagagatggtTCTGAGCTTTCACTGGACAGAAGAAGGGAACTTGGATTCACATTTTCTTTCCCTGTGAAACAAATGTCTGTTTCCTCGGGCATTTTAATAACATGGACGAAAGGGTTTTCCATTGTAGATATGGTAGGAATAGATGTTCCTGCATGTTTGCAGGAAGCATTGACACGGAAAGGACTAGACATGCACGTGGCTGCTTTGGTCAATGACACTGTTGGAACATTAGCTCTTGGAAATTATCATGACTCAGATACTGTTGCTGCCGTAATAATTGGCACTGGTACCAATGCTTGCTATTTGGAACGGGTTGATGCTATTATCAAGTGTCAAGGTCTTCTTACAACATCTGGATACATGGTTGTAAATATGGAATGGGGAAACTTTTGGTCATCTCATTTACCAAGAACATCTTATGATATTGATTTAGACTCCGAAAGCCCTAATCCAAATGATCAGGGTTTTGAGAAAATGGTATCAGGAATGTATCTTGGTGACATCGCGAGGAGAATCATTCTAAGGATGTTGCTAGAGTCGGATATGTTTGGACCTACTTCTGCCAAGCTTTCAATGCCTTTCATTCTGAGGACTCCTATGATGGCTGCCATGCACGAGGATGATTCTCCTGACTTGAGAGAAGTAGCAAGAATCCTTACAGACACCCTTGAGATTCCTGATGTTCCTTTGAAGTTAAGAAAAGTTGTGGTGAAGGTGTGTGATGTGGTGACTCGCAGAGCTGCGCGATTGGCAGCTGCCGGTATTGTTGGTATCTTAAAGAAGATTGGTAGGGATGGAAGTGGTGGCATCACAGGTGGGCGTAGAAGtgatatgaaaatgaaaagaacagTTGTGGCAATTGAAGGAGGTTTATATTCTAGCTATACATTGTTTAGGGAGTACTTGCATGAAGCTTTGAACGAAATATTGGGGGAAGATATTGCCAAGCATGTAATTCTTAAGGTCACTGAAGATGGATCGGGCATTGGAGCAGCACTGCTTGCTGCCTCGCATTCATCCTATAATGTGGATACAGTACAGCAgctataa 1524 0.4383 MGRVAVGVAVGAAVAACAVAAVVVGRRMRNRGKWKRVVRVLREVEEGCETSVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTYVHNLPNGTETGTYYALDLGGTNFRVLRVHLHGQQSSVLEHEVERQPIPQHLMTSTSEDLFDFIASSLKEFIEKERDGSELSLDRRRELGFTFSFPVKQMSVSSGILITWTKGFSIVDMVGIDVPACLQEALTRKGLDMHVAALVNDTVGTLALGNYHDSDTVAAVIIGTGTNACYLERVDAIIKCQGLLTTSGYMVVNMEWGNFWSSHLPRTSYDIDLDSESPNPNDQGFEKMVSGMYLGDIARRIILRMLLESDMFGPTSAKLSMPFILRTPMMAAMHEDDSPDLREVARILTDTLEIPDVPLKLRKVVVKVCDVVTRRAARLAAAGIVGILKKIGRDGSGGITGGRRSDMKMKRTVVAIEGGLYSSYTLFREYLHEALNEILGEDIAKHVILKVTEDGSGIGAALLAASHSSYNVDTVQQL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3083 507 Gene3D - 83 493 - -
Ssu3g3083 507 Gene3D - 61 482 - -
Ssu3g3083 507 SUPERFAMILY Actin-like ATPase domain 244 498 IPR043129 -
Ssu3g3083 507 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Ssu3g3083 507 Pfam Hexokinase 41 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Ssu3g3083 507 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Ssu3g3083 507 Pfam Hexokinase 247 494 IPR022673 GO:0005524|GO:0005975|GO:0016773
Ssu3g3083 507 PANTHER HEXOKINASE 1 500 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Ssu3g3083 507 ProSiteProfiles Hexokinase domain profile. 35 494 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Ssu3g3083 507 PRINTS Hexokinase family signature 98 114 - -
Ssu3g3083 507 PRINTS Hexokinase family signature 224 240 - -
Ssu3g3083 507 PRINTS Hexokinase family signature 247 261 - -
Ssu3g3083 507 PRINTS Hexokinase family signature 312 334 - -
Ssu3g3083 507 PRINTS Hexokinase family signature 394 416 - -
Ssu3g3083 507 PRINTS Hexokinase family signature 172 197 - -
Ssu3g3083 507 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
Ssu3g3083 507 PANTHER HEXOKINASE-3 1 500 - -
Ssu3g3083 507 SUPERFAMILY Actin-like ATPase domain 24 242 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3083 Ssu-Chr3 86516487 86521330 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3083 K00844 - gmx:100813589 837.795