Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3080 ATGCGCGGAAGCTACGGACGGTGGGGAAACGAAGAACAAGGGTTTGACGGAGGTGACGGAGATGGTGATGCTCACAGATCTGTTGGTAATGCGACGGTGACAGGGACGTCGACGGAGGTTCGTGTGGCATCGACCGGCTCACCGCGGAGGCGCGACAGTACCGTTATGGCCAATAGCGGTTTGCACCACAGTTCGCAATGCTCGCGACGGCCATTTTCTAAGCATTGTTGTGACCCAGTTGTGGGATTTATTTTGACAAATCGAAGCACGAACATGGCAAGTGCTAGCACTTATTTGACCTTCGCAATGTTGGTGGTTGCTGGATCTTTAATATATAACACAAAAGAGGTTTCAGCTCAATGTGGAGGAAGTGTTTCAGATCTTGTAGCCCAGTGCTCACAGTTTGTGCAAAAGTCGGGACCATTTATTCGGCCTTCACCGGGGTGCTGTGCAGTgctgaaaaaatttaatgtccCATGCGCATGCAAACTTGTTACTAAAGAAGTTGCAAACCTTGTGAGTGTTCCGAAGGCAATCTTTGTTGCACGCTCTTGTGGATTGAACCTTCCCCCCGGAATGCAATGTGGAGCTATTAAAGTGCCGCCGAAATTCATGAAGTGA 621 0.4831 MRGSYGRWGNEEQGFDGGDGDGDAHRSVGNATVTGTSTEVRVASTGSPRRRDSTVMANSGLHHSSQCSRRPFSKHCCDPVVGFILTNRSTNMASASTYLTFAMLVVAGSLIYNTKEVSAQCGGSVSDLVAQCSQFVQKSGPFIRPSPGCCAVLKKFNVPCACKLVTKEVANLVSVPKAIFVARSCGLNLPPGMQCGAIKVPPKFMK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3080 206 PANTHER LIPID TRANSFER PROTEIN 95 203 - -
Ssu3g3080 206 MobiDBLite consensus disorder prediction 1 57 - -
Ssu3g3080 206 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 95 203 - -
Ssu3g3080 206 Pfam Probable lipid transfer 102 195 IPR016140 -
Ssu3g3080 206 Gene3D - 117 193 IPR036312 -
Ssu3g3080 206 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 120 197 IPR036312 -
Ssu3g3080 206 MobiDBLite consensus disorder prediction 29 57 - -
Ssu3g3080 206 CDD nsLTP_like 121 191 IPR044741 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g3080 100 201 Acyl Lipid Metabolism Gene Families AT4G33550 37.736 1.18e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3080 - - gmx:112998582 197.593