Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3074 ATGGAAGAAGAGACAAAAGTCATATCAGAAGTTTCAGTGACAAAGGTTGTTAAGGAGGTGGCTCATAAGAATGATAGCATTAAGGAGAGAAATGGAGACTTGCCGAGTGAAgtaaagaaagaagaggaagagaatgcGTTTGATGGTGAATTCATTAAagttgagaaagaagagaaTGCCATAGATGATAAGTCTCGCAAAACTGAAAGAAGCTCAGATTCTCCAAACAGAGAATTTCTAGAAGCTCAAGAGAAGATACAGGAACTTGAGGTTGAACTCCAAAGACTAACTGAATCTTTGAAGACCTCTGAGCATGAAAATGATCAGCTGAAGGGAGAGATATCAGTTACAAAAGAGAAATTGGAGGAAAGTGGAAAGAAATATGAAGAGCGTGAACTCAGTCACAAGAAATTGCAAGAGCAGATTGTTGAAGCAGAGAATAAATATAATCAGCAGCTCAACACTCTTGAAGAGGCACTGCAAAATCAAGAAGTGAAGCACAAAGAGCTTCTTCATGTGAAGGAAGCATTTGATGGTATGAACCTTGAGCTTGAAAACTCCAGAAAGAGGATACAGGAATTGCAGCTTCAGCTGCAACTTTCAGCTGACGAGGCACGGAAATTTGAGGAGCTGCATAAGCAAAGTGGTTCACATGCTGAATCAGAGGGAAAGAAGGCCTTAGAATTTGAGAGACTACTTGAAGAAGCCAAACTGAGTGCAAAAGGAATGGAAGATGAGATGACTTCCCTTAAGGAAGAATTGAAGGGAGTTTATGATAAGATTGCTGAAAATCAAAAGGTTGAAGAGGCACTTAAAACAACCACAGCAGAACTCTCTACCATCCAAGAGGAGTTGACACTCTCAAAATCCCAGCTATTGGAAGTTGAGAAAAGAATGTCTTCAAGGGACTCTTTAGTGGATGAGTTGACCCAGGAATTAAACCTGATAAAGACTTCAGAAACACAGCTAAAGGAAGACATGTCAGTACTTCAAAATCTATTTGCCTCTACAAAGGAAGAACTGCAAGAAAAAAATTCTGAGTTGGAAACTGCAAGGTTCAAGTTGCAGGAGGAGGAAAAATTGAGGGAATCAATTGAAGCTGCATTCAAGAGTCGGGAGGCACAGTTTCTCACTGCACAAGAGGAACTGACTaaacttaaaatagaaaaagaaactcTTGGAGCAACCGTGGAAGATCTAACCCGTAATTCAAAGAAGTTTGAGGAGTTGTGTGCTGATTTAGAGGAAAAGCTAAAGCTCTCAgacgaaaattttcttaaaacagATTCTCTTTTATCTCAGGCACTTTCAAACAATGCAGAGCTTGAGCAGAAGGTAAAGTCTTTGGAAGATCTCCATAATGAATCTGGAACTGCTGCAGCTACTGCTACTCAAAGGAATCTTGAGCTTGAGGGACATATTCAGACTTCAATTGCAGCTGCAGAAGAGGCAAAATTACAATTGAGGGATCTGGAAACACGCTTCATAGCAGCAGAACAGAGGAATGTTGAGCTTGAGCAACAATTAAACTTGGTACAATTGAAAACCAGTGATGCTGAGAGAGAAGTGACTGAATTCTCTCAGAAAATATCTCATCTCAATGCTAAATGGGAAGAGGCCGAGGAAGAGAAAAATCTTCTTAATCGACAACTGCAGGAGTACATGGAAAAGGTAATTCAACTTGAATCAGACTTAAATCAATCATTGTTGCGGAGTTCACAATTAGAGGAGGAGCTGAAGATAGTCAATGACAAATGTTCCTGA 1764 0.3827 MEEETKVISEVSVTKVVKEVAHKNDSIKERNGDLPSEVKKEEEENAFDGEFIKVEKEENAIDDKSRKTERSSDSPNREFLEAQEKIQELEVELQRLTESLKTSEHENDQLKGEISVTKEKLEESGKKYEERELSHKKLQEQIVEAENKYNQQLNTLEEALQNQEVKHKELLHVKEAFDGMNLELENSRKRIQELQLQLQLSADEARKFEELHKQSGSHAESEGKKALEFERLLEEAKLSAKGMEDEMTSLKEELKGVYDKIAENQKVEEALKTTTAELSTIQEELTLSKSQLLEVEKRMSSRDSLVDELTQELNLIKTSETQLKEDMSVLQNLFASTKEELQEKNSELETARFKLQEEEKLRESIEAAFKSREAQFLTAQEELTKLKIEKETLGATVEDLTRNSKKFEELCADLEEKLKLSDENFLKTDSLLSQALSNNAELEQKVKSLEDLHNESGTAAATATQRNLELEGHIQTSIAAAEEAKLQLRDLETRFIAAEQRNVELEQQLNLVQLKTSDAEREVTEFSQKISHLNAKWEEAEEEKNLLNRQLQEYMEKVIQLESDLNQSLLRSSQLEEELKIVNDKCS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3074 587 Coils Coil 79 120 - -
Ssu3g3074 587 Coils Coil 177 211 - -
Ssu3g3074 587 PANTHER EARLY ENDOSOME ANTIGEN 1 587 - -
Ssu3g3074 587 Coils Coil 306 368 - -
Ssu3g3074 587 MobiDBLite consensus disorder prediction 97 134 - -
Ssu3g3074 587 PANTHER EARLY ENDOSOME ANTIGEN 1 587 - -
Ssu3g3074 587 Coils Coil 128 173 - -
Ssu3g3074 587 Coils Coil 383 424 - -
Ssu3g3074 587 Coils Coil 264 284 - -
Ssu3g3074 587 Coils Coil 226 260 - -
Ssu3g3074 587 MobiDBLite consensus disorder prediction 24 83 - -
Ssu3g3074 587 Coils Coil 474 585 - -
Ssu3g3074 587 SUPERFAMILY Tropomyosin 380 583 - -
Ssu3g3074 587 Coils Coil 432 452 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3074 - K20283 gmx:100801514 934.865