Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3064 ATGAAGCTGATCAAACCATCACAACTACGTGCCTTGCTGAGCTTCTGCTCCATTTTGCTGCTATCGGAATTCGTTTTCGTCGCTGCGGAGGACCCTTATAGATTCTTCGACTGGAACATTACCTACGGAGACATTTATCCCCTAGGAGTTAAACAACAGGGTATTCTTATCAATGGCCAATTTCCAGGCCCTGAAATCTATTCTGTCACCAATGACAATTTGATCATCAACGTACACAATAACTTGCCCGAGCCGTTTCTTCTATCATGGAATGGTGTTCAGCAAAGGAGAAATTCTTATCAAGATGGAGTTTATGGAACCACATGCCCCATCCCTCCTGGCAAGAACTTCACCTACACACTTCAAGTCAAAGATCAAATTGGAAGTTTCTTCTATTTCCCATCTCTTGCTTTCCACAAGGCAGCTGGTGGCTTTGGAGGCATAAAAATCCTTAGCAGGCCAAGGATTCCCGTCCCATTCCCAGACCCAGCTGATGATTTCACCCTTCTTATTGGAGATTGGTACCAAATCGATCACAAAaAGCTGAAGAGCGTTCTAGATTTTGGACACAGACTTCCATTCCCTCAAGCCGTTCTTATCAATGGTCGTCCAAACGGCACAACATACACAGTTGAAAAAGGGAAAACATACAGGCTTAGAATATCAAATGTTGGACTTCAAAACACTCTCAACTTTAGGATTCAAGGCCACAACATGAAGTTGGTGGAAGTTGAGGGAACTCACACAGTACAGACCACGTATTCCTCGATAGATGTTCATGTGGGACAGTCTTACTCGGTGCTTATCACAGCTGACCAAGCACCCAAGGACTACTACATTGCAGTGTCCACTCGTTTCACTAACAGAATCCTCACAAGCACTGCCATCCTTCACTACAGTAACTCCCAGCAATCTGTTTCTGGCCCAATTCCTGGTGGCCCAACCACTCAAATCGATTGGTCCATAGAACAAGCTCGTTCAATCAGGACAAACCTGACTGCGAGTGGACCAAGGCCAAATCCACAAGGCTCCTACCACTATGGTCTCATAAACATTAGTAGGACAATTATGCTCGAGAGCTCAGCAGCACAAGTGAATGGGAAGCAGAGATATGCAGTGAACAGTGTTTCATTCATACCAGTTGACACTCCTCTGAAGCTAGCAGATTACTTCAAGATTGGTGGGGTTTTCCAAGTTGGAAGCATCCCAGATACCCCTTCTGGTAAACCCATGTATCTTGACACCTCAGTTATGGGTGCTGATTTTCGAGCCTTCGTTGAGATCGTGTTTCAGAACCACGAAAGCATCGTCCAGAGCTGGCACATTGACGGGTACTCATTTTGGGTTGTAGGAATGGACGGTGGTGTGTGGACGCCTAATAGTCGTAACCAGTACAACCTCAGAGATGCGGTACCGAGGTGCACAACACAGGTATATCCCAAGTCATGGACCGCAATTTATATGGCACTAGATAATGTGGGTATGTGGAACGTGAGGAGTGAATTTTGGGCACGACAGTACCTTGGACAACAGTTCTATTTGCGAGTGTATTCACCAGTAGATTCCATCAGGGATGAATATCCAATTCCAAAGAATGCTCTTCTCTGTGGTAAAGCTGCAGGCAGAACAACCAGATCTCTATGA 1644 0.4544 MKLIKPSQLRALLSFCSILLLSEFVFVAAEDPYRFFDWNITYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVHNNLPEPFLLSWNGVQQRRNSYQDGVYGTTCPIPPGKNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGGIKILSRPRIPVPFPDPADDFTLLIGDWYQIDHKKLKSVLDFGHRLPFPQAVLINGRPNGTTYTVEKGKTYRLRISNVGLQNTLNFRIQGHNMKLVEVEGTHTVQTTYSSIDVHVGQSYSVLITADQAPKDYYIAVSTRFTNRILTSTAILHYSNSQQSVSGPIPGGPTTQIDWSIEQARSIRTNLTASGPRPNPQGSYHYGLINISRTIMLESSAAQVNGKQRYAVNSVSFIPVDTPLKLADYFKIGGVFQVGSIPDTPSGKPMYLDTSVMGADFRAFVEIVFQNHESIVQSWHIDGYSFWVVGMDGGVWTPNSRNQYNLRDAVPRCTTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYLRVYSPVDSIRDEYPIPKNALLCGKAAGRTTRSL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3064 547 SUPERFAMILY Cupredoxins 26 180 IPR008972 -
Ssu3g3064 547 CDD CuRO_1_AAO_like_1 35 150 IPR034273 GO:0005507
Ssu3g3064 547 Gene3D - 348 544 IPR008972 -
Ssu3g3064 547 SUPERFAMILY Cupredoxins 349 538 IPR008972 -
Ssu3g3064 547 Pfam Multicopper oxidase 40 153 IPR011707 GO:0005507
Ssu3g3064 547 Pfam Multicopper oxidase 383 519 IPR011706 GO:0005507|GO:0016491
Ssu3g3064 547 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 14 540 - -
Ssu3g3064 547 SUPERFAMILY Cupredoxins 160 339 IPR008972 -
Ssu3g3064 547 Pfam Multicopper oxidase 166 301 IPR001117 -
Ssu3g3064 547 CDD CuRO_3_AAO_like_1 380 501 IPR034275 GO:0005507
Ssu3g3064 547 Gene3D - 164 338 IPR008972 -
Ssu3g3064 547 PANTHER MULTI-COPPER OXIDASE 14 540 IPR045087 -
Ssu3g3064 547 Gene3D - 33 154 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3064 Ssu-Chr3 86169391 86174530 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3064 - - gmx:100793934 1041.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3064 3 86169391 86174530 Ssu3g3064 3 86169391 86174530 ECH