Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3050 ATGCAGCTTTTTGCCCGGCGCCAAGGAGCACTTTTGTGCTTCTGGTTGTCTCTGCTTTTTGTGGTAGTAGACTTTTGCTATGGTGACCATAGGCTACGTGTAACAGTAGACTGCAAGGCAGCAAGTGGAGACTTTGAAAGGAGAGGGGTGGGtgagcttgatgaaaatggaaactTCAAAGTGTCCCTTCCTCATGACATTGTAAAAGCCGATGAACTCAAAGAAGAATGCTATGCTCAGCTTCTTAGCGCGTCAGCTGCACCTTGTCCTGCCCATGATGGTCCGTTCAGCACCAAAATTGTGATCAAGTCAAAAGCTGATGGCAAACACACCCTTGGTCCTGCTGGGAAACTCAAGTTTTCATCATTGACCTGCCCTTCAGCCTTCTTGTGGAAGCACCCGTTATTGCCTAAGTATCCCCATCCACCTATCAGCTTCCCTCCTAAAGTATTTCCACCAAAGATTTTCCATAAGCACCCTCTCTTTCCTCCTGTGCCTATCCATAAACCTCTCCCTCCACCTGTACCTGTCTATAAACCTCCTCCACTCCCACCAAAGCGTCCTCTTCCACCAAAACCACCGAAGGTTGAGCGTCCTCTTCCACCAAAACCACCGAAGGTTGAGCCTCCTCTTCCACCAAAACCACCGAAGGTTGAGCCTCCTCTTCCACCAAAACCACCAAAGGTTGAGCCTCCTCTTCCACCAAAACCACCGAAGGTTGAGCCTCCTCTTCCACCAAAACCACCGAAGgttaagcctcctcttccaccAAAGCCACCAAAGGTTGAGCGTCCTCTTCCACCAAAACCACCAAAGgttaagcctcctcttccaccAAAACCACCAAAGGTTGAGCCTCCTCTTCCACCAAAACCACCGAAGGTTGAGCCTCCTCTTCCACCAAAACCACCGAAGgttaagcctcctcttccaccAAAGCCACCAAAGGTTGAGCCTCCTCTTCCACCAAAACCACCGAAGgttaagcctcctcttccaccAAAGCCACCAAAGGTTGAGCCTCCTCTTCCACCAAAACCACCAAAGgttaagcctcctcttccaccAAAACCACCAAAGGTTAAGCCTCCTCTTCCGCCAAAACCACCGAAGGAGCCTCCTCTTCCGCCTAAACCACCAAAGGAGCCTCCTCTTCCGCCAAAACCACCAAAGGAGCCTAAGCCATGTCCACCAATCTACAAGAAGCCACTTCCTCCACTCCCTAAGTTGCCTCCACTCAAGCCACTTCCCAAACTCCCTCCAAAGCACTTTTTCCATCACCCCAAATGGCCTCCACTACCTCCAAAGCCCTTTTTCCATCACCCCAAGTATGGGAAATGGCCTCCAGTACCACCTTTTTCAACTCATCCTTAG 1374 0.46 MQLFARRQGALLCFWLSLLFVVVDFCYGDHRLRVTVDCKAASGDFERRGVGELDENGNFKVSLPHDIVKADELKEECYAQLLSASAAPCPAHDGPFSTKIVIKSKADGKHTLGPAGKLKFSSLTCPSAFLWKHPLLPKYPHPPISFPPKVFPPKIFHKHPLFPPVPIHKPLPPPVPVYKPPPLPPKRPLPPKPPKVERPLPPKPPKVEPPLPPKPPKVEPPLPPKPPKVEPPLPPKPPKVEPPLPPKPPKVKPPLPPKPPKVERPLPPKPPKVKPPLPPKPPKVEPPLPPKPPKVEPPLPPKPPKVKPPLPPKPPKVEPPLPPKPPKVKPPLPPKPPKVEPPLPPKPPKVKPPLPPKPPKVKPPLPPKPPKEPPLPPKPPKEPPLPPKPPKEPKPCPPIYKKPLPPLPKLPPLKPLPKLPPKHFFHHPKWPPLPPKPFFHHPKYGKWPPVPPFSTHP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3050 457 PANTHER PROLINE-RICH PROTEIN 2 32 186 - -
Ssu3g3050 457 Pfam Pollen protein Ole e 1 like 32 90 - -
Ssu3g3050 457 MobiDBLite consensus disorder prediction 178 416 - -
Ssu3g3050 457 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 32 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3050 Ssu-Chr3 85997931 85999765 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3050 - - ccaj:109788544 238.424