Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3046 ATGGAACTGACATGGTTGAGTGCCATTCTGGTCGGGGCTGGTTATCTCGCTTTGGGTTACTTCATTGGTTCTCGGTATCCCCCTCGTTTCCTCTTCTCACACAAATTATTGACTAAACATAAAGATGATTCACTTCTCATTGACAACAACGACAATAAGAGGAGAAACACTAAGTCCAAACTCAAAGACCCCCTTGAGATTGAACAGCTCGCTGACATTCTCGATGATTTTAAGATGATACTCGTTGTCAGGAATGATCTTAAAATGGGTAAAGGGAAGATTGCTGCTCAATGCAGTCATGCAACGTTAGGTCTCTATAAAAAGCTCCTTCATCGAGCACCAAAAGCTTTGAATAGGTGGGAGATGTCTGCGCAGCCTAAGGTTGTTGTCAAAATTGAAAGTGAAGAAGATATGCTGACTTTGCAAGAAAGGGCTAAATCTCTGAAGTTACCTACCCATATCACAATTGATGCCGGGAGAACACAGATTGCACCAAatTCCAGAACAGTGATGGCAATTCTTGGACCTGTTGAAGTGGTAGATGAGGTAACAGGTGGGCTGAAACTACTATAG 573 0.4258 MELTWLSAILVGAGYLALGYFIGSRYPPRFLFSHKLLTKHKDDSLLIDNNDNKRRNTKSKLKDPLEIEQLADILDDFKMILVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMSAQPKVVVKIESEEDMLTLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDEVTGGLKLL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3046 190 PANTHER PEPTIDYL-TRNA HYDROLASE 2 3 190 IPR002833 GO:0004045
Ssu3g3046 190 PANTHER OSJNBA0060D06.11 PROTEIN 3 190 - -
Ssu3g3046 190 TIGRFAM arch_pth2: peptidyl-tRNA hydrolase 78 190 IPR002833 GO:0004045
Ssu3g3046 190 CDD PTH2 77 190 IPR002833 GO:0004045
Ssu3g3046 190 Gene3D Bit1 75 190 IPR023476 -
Ssu3g3046 190 Pfam Peptidyl-tRNA hydrolase PTH2 77 190 IPR002833 GO:0004045
Ssu3g3046 190 SUPERFAMILY Peptidyl-tRNA hydrolase II 75 190 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3046 Ssu-Chr3 85939282 85943862 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3046 K04794 - gmx:100527794 347.821