Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3029 ATggccaaaaccaaaaccaaaatcaagGGCCTAGAATATCAAAAACCCAAAACCTCTCTTTATCTATGTTGCTTTGGATCAGTTCATCACAAAACTCCAACAGATCACTCGAGCATATCTGAACATAACGTAAAACAAAAGAGTCGAAGCAACAGCTGGTTTCCATGGCAAAGGATTAGACTTGGAGTGAAGAACTCAATGGCCAGAACGGTGCCGCTTGAAGGCACAGAGGTTCATGAAAAAGAGAAGCTGAAACTCAAATTCAAAGGCAAAGCTAACAAAGTTCATTCATCAATGTGGAAGTGGAACTCAAAGTCAAAGTCAGACTTACTCAACAGGACTCAAAGCAATTCCACACCCAATCAAACGCCCTCAAAGTCACAGCTAAACCGAGGAAACAACATAGAGGATGTCACGCGTCAACAGAGTAGGTCATCATCTCTCACAAAAGCCGCCTCACACAGAGTTTCTCTCCCAACTTCAAAACGGCAAGTGCGGCGCTTTCTCTCGTCAAAGCATTCTCAAACGACATCGAAACACGCCAAGCGCAAGCAGATTCAGAACGCAGAGAGGTATAATCCCGTGGTTGCCACGTCCGTGGTTATGATCGCTTTGGTATCAATGATACTGTGGGGTCGTTTGTGTTCCATCGCTTGCACCTCCGCGTGGTTGTATCTCATCCCCAGCTTCACCATGACAGCTGAAAACGACAAACAGAATTCCGTTAATGATTCAAACGACTTGGTTTTGGATTCGAAGATGGACAAGAGGAAAGTCATCCCACCCAAGATGTAG 795 0.4365 MAKTKTKIKGLEYQKPKTSLYLCCFGSVHHKTPTDHSSISEHNVKQKSRSNSWFPWQRIRLGVKNSMARTVPLEGTEVHEKEKLKLKFKGKANKVHSSMWKWNSKSKSDLLNRTQSNSTPNQTPSKSQLNRGNNIEDVTRQQSRSSSLTKAASHRVSLPTSKRQVRRFLSSKHSQTTSKHAKRKQIQNAERYNPVVATSVVMIALVSMILWGRLCSIACTSAWLYLIPSFTMTAENDKQNSVNDSNDLVLDSKMDKRKVIPPKM 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3029 264 MobiDBLite consensus disorder prediction 95 186 - -
Ssu3g3029 264 MobiDBLite consensus disorder prediction 97 175 - -
Ssu3g3029 264 PANTHER PROTEIN, PUTATIVE-RELATED 12 260 - -
Ssu3g3029 264 PANTHER OS07G0553800 PROTEIN 12 260 IPR040411 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g3029 Ssu-Chr3 85778783 85780003 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3029 - - gmx:102666041 273.478