Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3025 ATGAaacagaggaagaagaaaaatgggtTCAGGAGGCCTGTTATTATCAAAGAGCCGAAGCAACCGCAACAGCAACCCACGGTGGATCCTATTACGGGAAAGAAGATCCCCAAAAGTTTTGTGTTTTCACGAGGGAAGTTGCCGGGGCCTCTCAAACAGCTTCAAATGGACCTCAGAAAGTTGATGCTGCCATATACTGCTCTCAGCCTTAGGGAAAAGAAACGGAATAATCTGAAAGACTTTCTGAATGTTGCTGGACCTATGGGTGTCACACATTTCCTCATATTGTCAAAAACTGCAACTTCACCTTACTTGAGGGTTGCAACAACCCCTCAAGGGCCTACTCTTACGTTTAAGATACATGAATACTCATTGGCTGCTGACATTGCTCAATCTCAATTGCATCCTCGATGCCCTAAGGATCTGTTTAAAAATTCTGCTTTGATTGTGCTTTCTGGATTCGTGAGTGGAGATCTACCTCTACAGCTTACAACTAACATGTTTCAGAATATTTTTCCAACAATTGACGTCAAAACTGTTAAGCCCTCCTCTTGCCAAAGAATCCTGTTACTTAGTTACAACAAAGACACTAAGCTCATTGATTTTCGGCATTATTCCATAAGATTACAACCTGTAGGTGTTTCACGCAGAATAAGAAAACTTGTGCAGAGCCATCAGGCTCCTGATCTAAGGAATCTTCAAGACGTGAGTGATTTTGTCACAAAGGCTGGCTATGGATCAGAAAGTGAAGCTGATGAAGAAGCAGCAACAGTGACTTTGTCCAGTAATATTGGTAGAGTTAATCGTGCTTCTACAAAAAGTGCTGTCAAACTGCAAGAGGTAGGACCCAGGATGACTCTTCAACTAGTTAAAATTGAGAAGGGACTGTGTTCGGGTGAAGTTCTCTTCAGTGAATATGGAAAAGCTGGTGGCAAAGGAAAAAGTGATGATGAGATGCAGGGTGAAGAAGATTCAGAAGGCAGTGAAGTTGAAAAAGATCAGGATGGGGAACATCCAGAGGACAGTGAAGATGAAGATCAAGAACTTGATTAG 1053 0.4131 MKQRKKKNGFRRPVIIKEPKQPQQQPTVDPITGKKIPKSFVFSRGKLPGPLKQLQMDLRKLMLPYTALSLREKKRNNLKDFLNVAGPMGVTHFLILSKTATSPYLRVATTPQGPTLTFKIHEYSLAADIAQSQLHPRCPKDLFKNSALIVLSGFVSGDLPLQLTTNMFQNIFPTIDVKTVKPSSCQRILLLSYNKDTKLIDFRHYSIRLQPVGVSRRIRKLVQSHQAPDLRNLQDVSDFVTKAGYGSESEADEEAATVTLSSNIGRVNRASTKSAVKLQEVGPRMTLQLVKIEKGLCSGEVLFSEYGKAGGKGKSDDEMQGEEDSEGSEVEKDQDGEHPEDSEDEDQELD 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3025 350 PANTHER PETER PAN-RELATED 18 348 IPR045112 -
Ssu3g3025 350 MobiDBLite consensus disorder prediction 320 350 - -
Ssu3g3025 350 Pfam Brix domain 50 291 IPR007109 GO:0006364|GO:0019843
Ssu3g3025 350 PANTHER BNAANNG34990D PROTEIN 18 348 - -
Ssu3g3025 350 MobiDBLite consensus disorder prediction 306 350 - -
Ssu3g3025 350 SMART Brix_2 40 292 IPR007109 GO:0006364|GO:0019843
Ssu3g3025 350 MobiDBLite consensus disorder prediction 1 34 - -
Ssu3g3025 350 ProSiteProfiles Brix domain profile. 37 298 IPR007109 GO:0006364|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3025 K14859 - gmx:100800809 642.884