Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3008 ATGGCTGCAGTGACACACTCGAACATAGCAGAGCAGAGCAGTGCAGCTTCAAGTGAGAGAGTTAACGATGAAGTTGTCCCTATTGACGGTGTTCGCTGTAGCAATAGCATCCTTATCCCTTATTCCCCATCCCTGCTCATCGTCCCAATCCCAATGGCAGATCCTCACCAAACACAATTTCTCTTCTCAGATCCGACTCCATCCCCACCTCTTCCTTCTCGGTCCGGCGAGGCTCGATCCCTTATGAACGACGTCGCGCTCGCAGTTGCCGCCAAGCAGCAAGACTTCGCCCCTCTAAAACTCATGCTCATGCATAGAAACATCGAGAAGGTTCTAGCAGATTCCATAGGCGCTACCGATGACATAACACTCATTTATTTCCATTATTCCGTGTCTTACAAGTACCGAGGAAGACTCAGAGCTCAGAATATTCTGTCTTCGTTGTATCCTTATATATCCCTTGCGCCCGAGGAGGTTCCCCTCACAGCCCTCAACACTCCTCTGGATTTCAGATTATTCATCGATTCCACGGACAAAGCTGTTGTTCTCGTTGACTTTTGTGGATGGACGCCCAAGTTGCTCGCCAGAAGTACCAAAGATAATGGGACACAAAATGCTTTCGCCGTGCTTGGGAATCACCGTGGAAGGGGTTTTAGCAGGGGGAATAATAGAATAATGGTGTCGAGGGGGAAGACTAAGGTGGCTGAGGAAGATATGTGCAAGGCTGAACTCAGCGTTGATAAAGGGTTTTGTGAAGCTCCTTGGCTGGGGGAGTTTACCTCGTTAAATTATGGTCTTTTGGGCTCCAGGGATAGCAATCATCATGTTCTACATTCTTGTTCGTCTGAAGAATTTGAGCGGTTTCATTCTTTTTACTTGAAATTCATGACTGCGGTGAGAGAATTCTTTTTGCCTCCAGAGCGAAATAGATTTGGCTTGGTTTCAAATAGGTCGATGCTTTCATCCCTAGGTGTTGGTGACTATGGTCCATGGTTTGCAGTTCACTACCTAGCTGGATGTTCAAGTTGTtcaaatattcttaaagaaGAGGATGACTTGAATTATGTTTTGCagatgaataattattttgtcaaaGAGCTTGAAGGTAATGGGCATGATCAAGAGCCCATTCTGCCGGCAAATAAGCCATCTGTACTTCTATTTGTTGATAGATCATCGGATTCCTCAGAAACTAGGGGAAAAAGtatggaagctcttaaagctttTAGATTATTGGCACAGCACTATCATCACATGAATCAAACAGGTAAGAAGAATAATGATAGCCATGAAAAATTTTCTATCCGAGATTATCATGGTTTCAAGAGCACATCTGAACATCCTAGGTTAAAGTTGTCTATGGCAGCTCAGCCTCAGAAGATTTCTTCCATCATGATTATAAATGAGGGTAAGGAAGTTAGTTTGGGCAATATACCTTCTGATCTTCAAGGGAGTTCTTTGAACGAAATATTGGCTTATCTTCTTCAGCAAAAGAAGAATGGAAAACTAAGCTCCCTAGCAAAGGATTTAGGCCTCCAACTTTTATCTGATGATATTGATATCAGGTTAGCTAACACACAGCAATCACATTCAGAAGTTCAGTCAAATCAAATTTCAACAGAAACTTCTCAACAAGACCATACAGATACTGTGATGCTCGATGGAGATCCATATAGTTCTGCTGGAGAGCTTGAGGAAACTCCCAAATTGACCGAGTTATCTTCTCGGCATGATGAAGTGAAGAGACCTTCTATTGTCACACATGAGGAGATAAAATCTGTGCAATCTGAAGAATCTGTTGCCGATCATGAACTTTCTACCGTCAAATTTATGAAACCAGAAACAGATGATTCTTCAGGTGGAAACAAGTATGGGGGAGAACAGACTCATTTTCTTGGTTTTAATGGTTCCTTTTTCTATTCTGATGGTAATTATCAATTGCTTAAAAGACTCACAGGTGGTTGTGGAATTCCATCTTTGGTTATAGTTGATCCCTTTCAGCAGCAACATTATGTCTACCCCGATGAGAAAAGTTTCAACTTTTCTTCACTGTATGATTTTCTTTCTGAGTTTCTTAATGGAACCCTACTTCCATATCAGCAGTCAGAACATGTTCTTCGAGGCCAAAGGGAGGCCACCCATCCTCCCTTTGTTAATTTGGATTTTCATGAGGTGGATTCTATACCTCGAATCACGGCTCATACTTTCTTTGAACTTGTTATTGGTTTTAACCTTTCTAACAAAGAAAATGCTTCTAATGCATGGAATAAAGATGTCTTGGTCTTGTTTAGCAATAGCTGGTGTTCATTCTGCCAGCGAATGGAAATGGTTGTTCGTGAAGTATATCGGGCCATCAAGGGCTATGTGGATATGTTAAACAGGGGCTCGAATGTGAAAGGTATTTCTGATCATGAAAATTTGGATCATGTCATGATGAAGCTTCCGGTAATCTACTTGTTAGATTGTACATTGAATGACTGTGACTTGATACAGAAGTCAGTAGATCAGAGGGAAGTTTATCCTGCTCTGATTTTATTTCCAGCAGAAAAAAAGAGGCCTCTTCTTTATGAAGGAGATATGGCTGTAATTGATGTTATGAAATTTGTGGCTGAGCACGGAAGTAACTTTCATCATCTTATCAGAGACAAAGGGGCAGTTCTGTGGTTATCTGAAAGAGCAGTAAAGAATCAGAAATTATATGATGCTTTGCAAACTGACATCCACCCTGAATCACTTCATTTGCGCAACCAATATCACGGAGCTCCAGGTCAAGACAGAATGCTAGACCAGGTGGTCAGCCCTAACCTGATGAGTTCACATGTTTCAAATGGATTGCATGAAGCATTACCTCACGTGGGGATTGGTTCAGTGCTAATTGCCACAGAAAAGCTTTTGGGGGTTCAGCTATTTGATGGATCAAAGATTCTCATTGTTGCAGCCAATCAAGTAACTGGATTTCAAGGTCTTATCGTCAACAAACATATAGAATGGAGTTTTCTGCCTAAATTGGAAGAAGGCttggaaaaattgaaagaggCTCCTCTGTCCCTGGGGGGTCCAGTAATGAAAACTGGAATGCCTCTTTTATCCTTAACTAGAAGAGTTTCTGGAAATTATTTACCTGAAATCCTGCCTGGAATTTACTTCATTGATCATGTAATGACAATTCGTAAAATGGAGGAGATGAAGTCGGCAAATCAACCAGTCGGTGATTACTGGTTTTTCTTGGGGTATTCAAGTTGGGGATGGAACCAGTTACATGATGAGATGGCGGAAGGAGCTTGGAACTTGAGTGATGATGCAACGAGACATTTAAATTGGCCGTGA 3327 0.4109 MAAVTHSNIAEQSSAASSERVNDEVVPIDGVRCSNSILIPYSPSLLIVPIPMADPHQTQFLFSDPTPSPPLPSRSGEARSLMNDVALAVAAKQQDFAPLKLMLMHRNIEKVLADSIGATDDITLIYFHYSVSYKYRGRLRAQNILSSLYPYISLAPEEVPLTALNTPLDFRLFIDSTDKAVVLVDFCGWTPKLLARSTKDNGTQNAFAVLGNHRGRGFSRGNNRIMVSRGKTKVAEEDMCKAELSVDKGFCEAPWLGEFTSLNYGLLGSRDSNHHVLHSCSSEEFERFHSFYLKFMTAVREFFLPPERNRFGLVSNRSMLSSLGVGDYGPWFAVHYLAGCSSCSNILKEEDDLNYVLQMNNYFVKELEGNGHDQEPILPANKPSVLLFVDRSSDSSETRGKSMEALKAFRLLAQHYHHMNQTGKKNNDSHEKFSIRDYHGFKSTSEHPRLKLSMAAQPQKISSIMIINEGKEVSLGNIPSDLQGSSLNEILAYLLQQKKNGKLSSLAKDLGLQLLSDDIDIRLANTQQSHSEVQSNQISTETSQQDHTDTVMLDGDPYSSAGELEETPKLTELSSRHDEVKRPSIVTHEEIKSVQSEESVADHELSTVKFMKPETDDSSGGNKYGGEQTHFLGFNGSFFYSDGNYQLLKRLTGGCGIPSLVIVDPFQQQHYVYPDEKSFNFSSLYDFLSEFLNGTLLPYQQSEHVLRGQREATHPPFVNLDFHEVDSIPRITAHTFFELVIGFNLSNKENASNAWNKDVLVLFSNSWCSFCQRMEMVVREVYRAIKGYVDMLNRGSNVKGISDHENLDHVMMKLPVIYLLDCTLNDCDLIQKSVDQREVYPALILFPAEKKRPLLYEGDMAVIDVMKFVAEHGSNFHHLIRDKGAVLWLSERAVKNQKLYDALQTDIHPESLHLRNQYHGAPGQDRMLDQVVSPNLMSSHVSNGLHEALPHVGIGSVLIATEKLLGVQLFDGSKILIVAANQVTGFQGLIVNKHIEWSFLPKLEEGLEKLKEAPLSLGGPVMKTGMPLLSLTRRVSGNYLPEILPGIYFIDHVMTIRKMEEMKSANQPVGDYWFFLGYSSWGWNQLHDEMAEGAWNLSDDATRHLNWP 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3008 1108 Gene3D Glutaredoxin 625 702 - -
Ssu3g3008 1108 Pfam Uncharacterized ACR, COG1678 968 1100 IPR003774 -
Ssu3g3008 1108 PANTHER TRANSPORTER, PUTATIVE (DUF179)-RELATED 75 1108 - -
Ssu3g3008 1108 MobiDBLite consensus disorder prediction 1 20 - -
Ssu3g3008 1108 MobiDBLite consensus disorder prediction 527 551 - -
Ssu3g3008 1108 SUPERFAMILY VC0467-like 955 1101 - -
Ssu3g3008 1108 MobiDBLite consensus disorder prediction 1 21 - -
Ssu3g3008 1108 MobiDBLite consensus disorder prediction 527 550 - -
Ssu3g3008 1108 Gene3D Glutaredoxin 737 881 - -
Ssu3g3008 1108 SUPERFAMILY Thioredoxin-like 740 874 IPR036249 -
Ssu3g3008 1108 Gene3D - 954 1106 - -
Ssu3g3008 1108 PANTHER TRANSPORTER, PUTATIVE-RELATED 75 1108 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3008 - - gmx:100814325 1782.3