Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g3007 ATGCGAAATATCCCATGTCTTAAGACTCCAGTGAGAGTTATGGCAAATGCAGGAAATTTGATATCGCCAAGGAGCTTCAATCCAATATTCAATCTATGCCACCCTGCAGCTAAGTTCAAAACCTTCAGGTTGCTCTCTCGGCTTCACTCTTACAATAATGTCACTGTTACTGCTTCTTCCAAAAGAAAGGATAACTTGCACTCTCCATTGATTGGGAAGAACACAAGCAGGGGTGCTCGCCGTCTGATCACAATATCACCGGGTGATGGCAGATATCATGGGGATTGGACATGTGACTATCTCGTCTCTTTGCACGACCTACAGTTACAGGATTTGATTGAAGATGACAATAATCAACATAAGGATGCTCAAGTTTTCATCAACCTCTCCATCCAAAAGTCCCTGGTAATGCCAGCATGCTATAGCTTTGGTTTATCGGTGGATGGAAGAGTCATGACATCCTTCACTAGAAAATGTAGCAACTGTTCTACTCCGTATTGCCGACAGATTGATGCAAAATTTAACGTATGGGTTCTTATAGAACGTAGAGATAACCGCAAGATACCGCAACCTGAAATTGGAGGTGACCCTTATGTGATATATGTTAGACCGGGATACGAAGTTGATCTTGATTCTCTTGTACAAGAAGCCATCCGGCTAAACTCCTCAGTGAAAgACACTTGCTCGGAATTGTGCAAGAAATCTGAGGGTACAATACAATGTaagcatttcttttcttttatttga 747 0.411 MRNIPCLKTPVRVMANAGNLISPRSFNPIFNLCHPAAKFKTFRLLSRLHSYNNVTVTASSKRKDNLHSPLIGKNTSRGARRLITISPGDGRYHGDWTCDYLVSLHDLQLQDLIEDDNNQHKDAQVFINLSIQKSLVMPACYSFGLSVDGRVMTSFTRKCSNCSTPYCRQIDAKFNVWVLIERRDNRKIPQPEIGGDPYVIYVRPGYEVDLDSLVQEAIRLNSSVKDTCSELCKKSEGTIQCKHFFSFI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g3007 248 PANTHER LARGE RIBOSOMAL RNA SUBUNIT ACCUMULATION PROTEIN YCED HOMOLOG 2, CHLOROPLASTIC 14 240 IPR044985 -
Ssu3g3007 248 Pfam Large ribosomal RNA subunit accumulation protein YceD 147 242 IPR003772 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g3007 - - gmx:100788798 367.466