Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2991 ATGGCTTCCGCGTCGTCGAGAACCCTAACGGACATTTTCCAACCAGTTTCGAAGCGCTTGAAGCCCACTCTCCCCCCATCCTGCAAATCCGACGACGCCAACGCCTCCACGCTCTCCGTCGACCAAAAAGCGCGCGTCGAATACAACAAGCTCCTCGCCAAGTCCAAGAGGAATCTCAAACTCTGCGTCGAGAGGGTCGAGAAAAGCAAAGGCTTAGGTGGTGTGAAGCTGGAGCAGCTGCTGGTCGAGGAAACGTGGTTGGAAGCTCTCCCCGGTGAACTCCAAAAACCCTATGCCCTCACTCTCTCGAAATTCGTGGAAAGTGAGATTTCCAGCGGCGACGACGTCGTATACCCTCCCACGCACTTGATCTTCAACGCTCTTAACTCTACCCCTTTTCATAGAGTCAAAGCTGTCATCCTTGGACAGGACCCTTATCATGGGCCTGGTCAAGCAATGGGGCTTTCATTCTCAGTCCCTGAAGGGGTCAAAATCCCTTCCAGTttggtaaatttatttaaggagCTTCACCAAGACCTTGGCTGCTCCATTCCACCTCATGGAAATCTTCAAAAATGGGCTGTGCAGGGTGTTCTCTTACTCAATGCTGTTCTCACagTCAGGAAGCATCAAGCAAATTCTCATGCCAAAAAAGGTTGGGAACAATTTACTGATGCTGTTATCAAGACAATCTCACAGAAGAAGGAAGGAGTTGTGTTTCTGTTATGGGGAAACTCTGCTCGGGAGAAATCTAGGTTAATTGATGCAACAAAGCATCATGTTCTTAAAGCTGCACATCCTTCTGGTTTATCTGCAAATAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCGAACTAACCAACTTCTGGAGCAAATGGGGATTGATCCCATAGATTGGCAACTATAA 906 0.479 MASASSRTLTDIFQPVSKRLKPTLPPSCKSDDANASTLSVDQKARVEYNKLLAKSKRNLKLCVERVEKSKGLGGVKLEQLLVEETWLEALPGELQKPYALTLSKFVESEISSGDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLVNLFKELHQDLGCSIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVVFLLWGNSAREKSRLIDATKHHVLKAAHPSGLSANRGFFGCRHFSRTNQLLEQMGIDPIDWQL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2991 301 ProSitePatterns Uracil-DNA glycosylase signature. 137 146 IPR018085 GO:0006281|GO:0016799
Ssu3g2991 301 SMART UDG_2 129 289 IPR005122 -
Ssu3g2991 301 Gene3D - 65 301 IPR036895 -
Ssu3g2991 301 Pfam Uracil DNA glycosylase superfamily 134 288 IPR005122 -
Ssu3g2991 301 Hamap Uracil-DNA glycosylase [ung]. 83 300 IPR002043 GO:0004844|GO:0006281|GO:0006284
Ssu3g2991 301 TIGRFAM ung: uracil-DNA glycosylase 84 293 IPR002043 GO:0004844|GO:0006281|GO:0006284
Ssu3g2991 301 SUPERFAMILY Uracil-DNA glycosylase-like 81 301 IPR036895 -
Ssu3g2991 301 CDD UDG-F1-like 98 299 IPR002043 GO:0004844|GO:0006281|GO:0006284
Ssu3g2991 301 PANTHER URACIL-DNA GLYCOSYLASE 32 301 IPR002043 GO:0004844|GO:0006281|GO:0006284
Ssu3g2991 301 SMART UDG_2_a 129 289 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2991 K03648 - gmx:100818241 567.385