Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2974 ATGGGGGTTTCGGATAATTGCAAAGGGTTAATACTAGCGGTGGGTTCTAGTGCATTCATTGGTTCGAGTTTCATCTTGAAGAAGAAGGGTCTTAAGCGTGCCGCTGCACGCGGTACTCGTGCAGGAGTTGGCGGTTATACTTATCTACTAGAGCCCCTTTGGTGGGCTGGCATGGTAACAATGATTATTGGGGAGGTTGCAAATTTTGTGGCTTATATCTATGCTCCGGCTGTTCTAGTTACTCCCCTTGGTGCACTTAGTATTATTGTCAGTGCTGTTTTGTCTCACTTCTTGTTGAAGGAACGGCTTCCGAAGATGGGGGTGTTGGGATGTATATCCTGCATTGTGGGATCGGTTATTATTGTCATCCATGCACCGCAAGAGCAGACTCCGAATTCTGTTCAAGAAATATGGGATCTGGCCACTCAACCAGCATTTCTGACCTACGTGGTGGCAACAGTTTCAGTAGTTTTGGTCTTGATCATACACTTTGAACCTCGCTATGGACAGACTAATATGCTGGTCTACTTGGGAATTTGTTCATTAGCTGGCTCACTTACGgtTGTGAGCATAAAGGCCATTGGAATTGCAATAAAGCTTACACTTGATGGAATAAGTCAAATAGCTTATCCTCAGACTTGGTTTTTTCTTACTGTCTCCACAATCTGTGTCATTACACAGTTGAATTATCTTAATAGGGCTCTGGATACATTCAATGCCGCAATTGTCTCTCCTGTATATTATGTAATGTTTACAACTCTTACTATCATTGCCAGTGCAATAATGTTTAAGGATTGGTCCGGTCAGGATGTCAGCAGTGTAGCCTCTGAGATATGTGGATTCATCACTGTTCTTTCAGGAACAATCATATTGCACATGACTAGAGAACAGGAAGAATCTAATATGCAAAGGACCTTGACATGGTTTATCAGCGAGGATTCGACGAAGGGTGAGGATGAACACCTGATCCTTATACGTGATTCGGATTATCTCGAACGTTGA 1002 0.4301 MGVSDNCKGLILAVGSSAFIGSSFILKKKGLKRAAARGTRAGVGGYTYLLEPLWWAGMVTMIIGEVANFVAYIYAPAVLVTPLGALSIIVSAVLSHFLLKERLPKMGVLGCISCIVGSVIIVIHAPQEQTPNSVQEIWDLATQPAFLTYVVATVSVVLVLIIHFEPRYGQTNMLVYLGICSLAGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVSTICVITQLNYLNRALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSSVASEICGFITVLSGTIILHMTREQEESNMQRTLTWFISEDSTKGEDEHLILIRDSDYLER 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2974 333 PANTHER UNCHARACTERIZED 2 332 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ssu3g2974 333 Pfam Magnesium transporter NIPA 5 296 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ssu3g2974 333 PANTHER MAGNESIUM TRANSPORTER NIPA6-RELATED 2 332 - -
Ssu3g2974 333 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2974 Ssu-Chr3 84872529 84875218 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2974 K22733 - gmx:100817349 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2974 3 84872529 84875218 Ssu3g2974 3 84872529 84875218 ECH