Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2933 ATGGGTGCTCTGGATCACATCTCTGAGCTCTTTGACTGCTCCCACACCAGCTCCAAGCTCAAGAAGAAGCGCAAGCAATTCCAGACGGTGGAGGTGAAAGTGAAGATGGACTGCGAAGGGTGCGAGAGGAAGGTGAAAAAATCGGTGGAGGGGATGAAAGGGGTGACCCAAGTGGAGGTGGATCGCAAGGCCAGCAAGGTCACTGTTTCGGGCTATGTTGAACCCTCCAAGGTGGTGTCTCGCATCGCTCACCGCACGGGTAAGAGGGTGGAGCTATGGCCTTACGTGCCATACGACGTCGTTGCGCACCCTTACGCCCCTGGTGTGTACGACAAGAAAGCGCCCTCTGGTTACGTGCGAAACGCCGACGTGGACCCTCACGTGTCCAACCTCGCACGTGCCAGCTCCACGGAGGTCAAGTACACCACCGCTTTCAGCGACGACAACCCCGCCGCATGTGCCGTTATGTGA 471 0.5775 MGALDHISELFDCSHTSSKLKKKRKQFQTVEVKVKMDCEGCERKVKKSVEGMKGVTQVEVDRKASKVTVSGYVEPSKVVSRIAHRTGKRVELWPYVPYDVVAHPYAPGVYDKKAPSGYVRNADVDPHVSNLARASSTEVKYTTAFSDDNPAACAVM 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2933 156 CDD HMA 31 91 IPR006121 GO:0046872
Ssu3g2933 156 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 156 - -
Ssu3g2933 156 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 156 IPR045181 GO:0046872
Ssu3g2933 156 ProSiteProfiles Heavy-metal-associated domain profile. 36 82 IPR006121 GO:0046872
Ssu3g2933 156 SUPERFAMILY HMA, heavy metal-associated domain 27 94 IPR036163 GO:0046872
Ssu3g2933 156 Pfam Heavy-metal-associated domain 32 84 IPR006121 GO:0046872
Ssu3g2933 156 Gene3D - 13 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2933 Ssu-Chr3 84332323 84332895 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2933 - - gmx:547973 306.219