Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2924 ATGACCGACAGCTCATCCTCGAAAAAGCACGGTCAAAATCAGCCTGAATTAAGTGATCCTACCCCCAAATCCCAGCGATTCAAAATGGGCAAATCCGAAGACCACGATAAGAAGAACTTGGGTAAGAAACTCAAAGATCTGGAAATAAGCGTTCCAATAGTGTATGGGAACACAGCATTTTGGCTTGGCAAAAAGGCTAGCGAGTATCAGTCGCATAAATGGACAGTATATGTTCGTGGAGCAACCAATGAGGATCTTGGGACGATAATAAAGCGTGCTGTTTTTCAGTTGCATTCTAGTTTCAATAATCCCACACGTGTTGTGGAGTCGCCACCTTTTGAATTGTCAGAGTCAGGATGGGGGGAATTTGAAGTTGCCATCACACTTTATTTCCACAGTGATGTTTGTGACAAGCCTTTGAACTTATATCATCACTTGAAGTTGTATCCAGAGGATGAAAACAGTTCCATGTCCACAAAGAAGCCTGTTGTTGTGGAGTTTTATGATGAGATAGTTTTCCCTGATCCTTCCGAGGCTTTTTTAGCTCGTGTGCAAGGTCATCCAGCTGTGAATTTGCCAAGATTACCTGCTGGGCTTACCTTGCCTCCTCCCATACCTGTTGAGGATGCAAGTAAAAGGAGGAAAGGTGATACCAAAGATCATTCCTTAAGTCAATGGTTCACAAATTTCTCGGAAGCGGATGAGCTCTTACAGCTTGCAGCAGCTCGTCAGCAGGTATTTATGACAATACTAGaatcatatttaaagtatataatatttgtgGATGTCAATGCTATTGTTAATTGTTGA 810 0.4148 MTDSSSSKKHGQNQPELSDPTPKSQRFKMGKSEDHDKKNLGKKLKDLEISVPIVYGNTAFWLGKKASEYQSHKWTVYVRGATNEDLGTIIKRAVFQLHSSFNNPTRVVESPPFELSESGWGEFEVAITLYFHSDVCDKPLNLYHHLKLYPEDENSSMSTKKPVVVEFYDEIVFPDPSEAFLARVQGHPAVNLPRLPAGLTLPPPIPVEDASKRRKGDTKDHSLSQWFTNFSEADELLQLAAARQQVFMTILESYLKYIIFVDVNAIVNC 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2924 269 MobiDBLite consensus disorder prediction 1 21 - -
Ssu3g2924 269 CDD YEATS_TFIID14_like 49 180 - -
Ssu3g2924 269 Gene3D YEATS domain 44 196 IPR038704 -
Ssu3g2924 269 Pfam YEATS family 71 150 IPR005033 GO:0006355
Ssu3g2924 269 ProSiteProfiles YEATS domain profile. 43 187 IPR005033 GO:0006355
Ssu3g2924 269 MobiDBLite consensus disorder prediction 1 39 - -
Ssu3g2924 269 PANTHER YEATS DOMAIN 16 251 IPR005033 GO:0006355
Ssu3g2924 269 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 16 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2924 Ssu-Chr3 84144738 84146571 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2924 K11341 - gmx:100790602 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2924 3 84144738 84146571 Ssu3g2924 3 84144738 84146571 ECH