Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2916 atggaaatgtGTGGAGCCACATCTCTGACATGGTCTCACACCATCTGTCCATCCCTACACCTTCCTCGATCCCTCTCTACCAGGGAGGCTAGGAGCTTCAGGGTTTGGTGTGTCTCTGATCAAAACCCCAAGGGAAATAAAATGATCATATCTATAACTGGAGCAACAGGTTTTATTGGTAGAAGGTTGGTGCAAAGACTGTATGCAGACAATCATAGTGTTCATGTCTTGACGCGATCTAAATCTAAAGCAGAAACAATTTTTCCCGCAAAAGACTTTCAAGGAATCAAGATTGCAGAGGAGACAGAATGGAAAGATAGCATTCGGGGCTCAACGGGGGTTGTGAATTTGGCTGGACTGCCCATAAGTACCCGATGGTCTCCTGAGATAAAGAAGGAAATCAAGCGAAGCAGGATTAGAGTGACCTCAAAGATTGTAGAATTGATAAACAGTGCACCAGATGATATACGACCTAAAGTTTTTGTTAGTGCAACGGCTGTTGGTTATTATGGCACCAGTGAGACACAACTCTTCGATGAACAAAGTCCATCAGGAAATGATTACTTGGCCGagGTTTGTAGGGAATGGGAATCCACTGCCCTAAAGGTAAACGGAGATGTTAGAGTGGCTTTAATTCGTATTGGTGTTGTTCTTGGGAAAGATGGTGGAGCACTAGCTAAAATGATACCTATCTTCAACTTGTTCGCTGGTGGACCTCTAGGCTCTGGAAAACAATGGTTCTCCTGGATTCATTTGGATGACATTgtcaatttaatatatgaagCGCTATCAAATCCATCTTACAAAGGTGTTATCAATGGAACTGCACCAAATCCTGTGCGATTGGCAGAATTGTGTGACCAGCTGGGACATGTCTTGGGTCGTCCCTCATGGCTGCCGGTACCTGACTTTGCACTCAAGGCTGTCCTTGGAGAAGGTGCTTCTGTGGTTTTAGAAGGGCAGAGAGTGGTTCCTACTCAAGCTAAGAAGTTGGGTTTCCCATTCAAATATTCTTACGTGAAGGATGCCCTTAAAGCAATTCTTTCTTGA 1050 0.4333 MEMCGATSLTWSHTICPSLHLPRSLSTREARSFRVWCVSDQNPKGNKMIISITGATGFIGRRLVQRLYADNHSVHVLTRSKSKAETIFPAKDFQGIKIAEETEWKDSIRGSTGVVNLAGLPISTRWSPEIKKEIKRSRIRVTSKIVELINSAPDDIRPKVFVSATAVGYYGTSETQLFDEQSPSGNDYLAEVCREWESTALKVNGDVRVALIRIGVVLGKDGGALAKMIPIFNLFAGGPLGSGKQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLAELCDQLGHVLGRPSWLPVPDFALKAVLGEGASVVLEGQRVVPTQAKKLGFPFKYSYVKDALKAILS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2916 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 345 IPR036291 -
Ssu3g2916 349 PANTHER SUGAR NUCLEOTIDE EPIMERASE RELATED 47 348 - -
Ssu3g2916 349 Coils Coil 345 349 - -
Ssu3g2916 349 TIGRFAM yfcH: TIGR01777 family protein 50 344 IPR010099 -
Ssu3g2916 349 Gene3D - 44 338 - -
Ssu3g2916 349 Pfam NAD dependent epimerase/dehydratase family 50 267 IPR001509 -
Ssu3g2916 349 CDD SDR_a8 50 348 - -
Ssu3g2916 349 Pfam Domain of unknown function (DUF1731) 301 347 IPR013549 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2916 K07071 - gmx:100814881 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2916 3 83983776 83989404 Ssu3g2916 3 83983776 83989404 ECH