Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2910 ATGGGAGCTATTGCTGGAGAAGAGCTGCTGAAATGGGAGAAGATGCAAGGAGTGAGTGGCCGCGAAGAGAAGATTCTTGTGTCAATAAGGCTGAGGCCTCTGAATGAGAAGGAAATTGCTGCTAATGAATCAGCAGACTGGGAATGCATTAATGATACTACCATCTTGTACAGGAACACACTGCGTGAGGGTTCCACATTTCCAAGCGCCTACACATTTGACAGAGTATTTCGGGGTGATTGTGTCACTAGGCAGGTATATGAGGAAGGGGCCAAAGAAGTTGCTCTTTCAGTTGTCGGTGGAATTAACTCAAGTATTTTTGCATACGGGCAAACAAGTAGTGGAAAGACATACACGATGGTTGGAATAACCGAATATGCTGTAGCAGATATTTTTGACTATATAAAGAGGCATGAAGAAAGAGCGTTTATATTGAAGTTCTCAGCAATTGAAATTTACAATGAAATTGTTAGAGACCTCCTCAGCACTGACAACACTCCACTTAGGCTACGTGATGATCCTGAGagAGGGCCCATTTTAGAGAAACTTACGGAGGAGACTCTACGGGACTGGGGGCATTTAAAAGAGCTTATAGCCTTCGGTGAAGCTCAGAGACAGGTGGGAGAGACATATCTAAATGAAAAGAGTTCTAGATCTCACCAAATTATCAGATTGACAATGGAAAGTTCTGCCAGGGAATTCCTGGGCAAAGGCAACTCAGCCACCCTAGTAGCTAGTGTgAATTTTGTTGATTTGGCAGGGAGTGAGCGCGCATCTCAGGCATCATCAGCTGGGATGAGATTAAAAGAAGGTTGTCATATAAACCGGAGTTTACTTACTCTTGGAACAGTTATTCGTAAGCTTAGTAAGGGAAGACATGGACACATCAATTACAGAGATTCCAAGTTGACACGCATCCTGCAACCTTGCTTGGGTGGAAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGAAGCCATGTTGAGCAAACCAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTGACCACTAAATCACAGGTTAATGTCGTGATGTCTGATAAGGCCTTGGTCAAGCATTTGCAAAAAGAGGTGGCTAGATTGGAGAGTGAGTTGAGAACTCCTGGTCCTGCTCCAACCAATTGTGATTATGCAGCtttgttgagaaagaaagaTCTCCAGATAGAAAAGATGGAGAAGGAGATCAAGGAGCTAACTAAGCAACGTGACCTTGCTCAATCAAGGGTTGAGGATTTGCTGCGCATGGTCGCAAAGGAGCAGATATCTGGAAAAGAAGGGGAAGATATCTGGGAAGATGACTGTTCAGTATCAGAGTCATTGAGCATTTGTGGTCTTCATCATCCTGATACACGCATTAGAGAGTTCAACAATCCTCATTATAAGGATGGAGACAGTGGAAGTAATCCTGATGAAGACCCTGATGATTACTGCAAAGACGTTCGATGTGTTGACAATGGGGAGTTGGCTTTACCAATATTTGGAGAGGAAAGTGGAACAAGCCAGGAAATATCTTCACATTTGAATGAAGATACTGGAGACAGTCAGATCCAAGAAAATTCATCATTGCTGGAGCAGAGGCTGCATGATGTACAGTCAACCATTGATTCTCTTGTATGTCCTTCCCCTGATGAACAATCTCCACAGGTCATGTCAGAAAATGTGTCAAATTATAAGAATCTTAAATTAACTAGAAGCTGGAGTTGTACGGAATATCATATGACTGGTTCTCCTGAGACAGTAGGAGAAATACAGAGGACTCCAGCCAATGGATATGACCAAGGATTCCCTGGAAGGCCGGATGGTTTGCGGAGAAAGTTTCCTCCATTAAATTATGATGGTTCCACAAGATTGTCAAGGAACGGTTCTCAGTCTTCCATTGGAAGTCCTTCTGTGGATGAGCTTAGAGCCAGCAGCATGAGAACATCTGCTGATGAGGATATTACTAGCATCCAGACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACAAGAATATGAGAAGCAGCTTGTTGATGGTCAGGATCAGGAGACAGGAAGAAAGAGGAACGTGAAAGATGTAGGTGTGGATCCGATGTTGGAGGCACCTGGAACTCCTTTAGATTGGTCTCTGGAATTCAAGAGACAGCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTGTGTACCATTGACCCACAGGACctacttctttcttttgttcAAGGGTGATCCAACAGACTCCATTTATATGGAGGTAGAACTTAGAAGACTATCCTTCCTCAAGGAAACATTTTCTGATGGAAACCAGTCTGTGAAAGACAGTCCAACAATCACATTAGCTTCAAGCGTGAAGGCTCTTCGCCGAGAAAGAGGAATGCTTGTCAAGCTTATGCAGAGGAGGCTTTCCGAGAACGAGAGAACAAGGCTATACGAGGAGTGGGGCATTGTATTGGATTCAAAGCGCAGGAGGATGCAACTAGCGAACCGTTTATGGAGCAACACTGATATGAATGACGTAATGCAAAGTGCTACAATAGTTGCCAAGTTAGTCAGATTTTGGGAGCGGGGCAACGCCCTCAAGGAGATGTTTGGGCTTAGCTTCGCACCCCAACTCACGGGGCGGAGATCTTATTCGTGGAGAAATAGCTGA 2661 0.434 MGAIAGEELLKWEKMQGVSGREEKILVSIRLRPLNEKEIAANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCVTRQVYEEGAKEVALSVVGGINSSIFAYGQTSSGKTYTMVGITEYAVADIFDYIKRHEERAFILKFSAIEIYNEIVRDLLSTDNTPLRLRDDPERGPILEKLTEETLRDWGHLKELIAFGEAQRQVGETYLNEKSSRSHQIIRLTMESSAREFLGKGNSATLVASVNFVDLAGSERASQASSAGMRLKEGCHINRSLLTLGTVIRKLSKGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKSQVNVVMSDKALVKHLQKEVARLESELRTPGPAPTNCDYAALLRKKDLQIEKMEKEIKELTKQRDLAQSRVEDLLRMVAKEQISGKEGEDIWEDDCSVSESLSICGLHHPDTRIREFNNPHYKDGDSGSNPDEDPDDYCKDVRCVDNGELALPIFGEESGTSQEISSHLNEDTGDSQIQENSSLLEQRLHDVQSTIDSLVCPSPDEQSPQVMSENVSNYKNLKLTRSWSCTEYHMTGSPETVGEIQRTPANGYDQGFPGRPDGLRRKFPPLNYDGSTRLSRNGSQSSIGSPSVDELRASSMRTSADEDITSIQTFVAGMKEMVKQEYEKQLVDGQDQETGRKRNVKDVGVDPMLEAPGTPLDWSLEFKRQQKEIIELWQSCCVPLTHRTYFFLLFKGDPTDSIYMEVELRRLSFLKETFSDGNQSVKDSPTITLASSVKALRRERGMLVKLMQRRLSENERTRLYEEWGIVLDSKRRRMQLANRLWSNTDMNDVMQSATIVAKLVRFWERGNALKEMFGLSFAPQLTGRRSYSWRNS 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2910 886 MobiDBLite consensus disorder prediction 508 525 - -
Ssu3g2910 886 MobiDBLite consensus disorder prediction 624 653 - -
Ssu3g2910 886 MobiDBLite consensus disorder prediction 505 525 - -
Ssu3g2910 886 ProSiteProfiles Kinesin motor domain profile. 24 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu3g2910 886 Coils Coil 355 375 - -
Ssu3g2910 886 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 886 - -
Ssu3g2910 886 CDD KISc_CENP_E 24 346 - -
Ssu3g2910 886 Coils Coil 392 426 - -
Ssu3g2910 886 SMART kinesin_4 22 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu3g2910 886 MobiDBLite consensus disorder prediction 623 653 - -
Ssu3g2910 886 Gene3D Kinesin motor domain 17 377 IPR036961 -
Ssu3g2910 886 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu3g2910 886 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu3g2910 886 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu3g2910 886 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu3g2910 886 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu3g2910 886 MobiDBLite consensus disorder prediction 463 488 - -
Ssu3g2910 886 Pfam Domain of unknown function (DUF3490) 715 874 IPR021881 -
Ssu3g2910 886 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 378 IPR027417 -
Ssu3g2910 886 Pfam Kinesin motor domain 30 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu3g2910 886 PANTHER CENTROMERE PROTEIN E 6 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2910 Ssu-Chr3 83932296 83943141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2910 22 427 Miscellaneous Gene Families AT5G06670 39.372 8.37e-83 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2910 K11498 - gmx:100820012 1602.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2910 3 83932296 83943141 Ssu3g2910 3 83932296 83943141 ECH