Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2907 ATGGCCTCTGCATCAGCCTCTCTGCTCAAGTCTTCACCTGTTCTTGACAAGTCTGAGTGGGTGAAGGGACAAACCCTTCGCCAACCTTCTGCATCAGTTGTAAGATGCAACCCCACCACCCCATCGGGCCTCACCATCAGAGCTGGTTCCTATGCTGATGAGCTCGTTAAGACCGCGAAAACAGTGGCTTCACCAGGGAGGGGTATTTTGGCCATGGATGAGTCGAATGCTACCTGCGGGAAGCGTTTGGCTTCAATTGGGTTAGAGAACACTGAAGTTAACCGCCAGGCATACCGTACCCTTCTTGTGACAGCTCCAGGCCTTGGTCAGTACATTTCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACAACTGATGGCAGGAAGATTGTCGATGTGCTCATCGAGCAAAACATTGTTCCTGGTATTAAAGTCGACAAGGGTTTGGTGCCCCTGGCTGGTTCCAATGACGAGTCATGGTGCCAAGGTCTAGATGGTCTTGCCTCTCGCACAGCTGCATACTACCAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTGGCAGTTAAGGAAGCAGCCTGGGGTCTGGCTCGCTATGCTGCAATTGCTCAGGACAACGGGTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGGGAGCATGGTATTGATAGGACTTATGAAGTAGCCCAAAAGTCTGGGCAGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTTTTCGAGGGTATTCTCCTTAAGCCTAGCATGGTTACACCCGGAGCTGAGTCCAAGGACAAGGCCAGTCCTCAGAAGGTTGCTGATTACACCCTCAAGCTCCTTCACAGGAGAATTCCCCCTGCTGTCCCTGGCATTATGTTTTTGTCTGGTGGACAGTCTGAGGTTGAGGCAACCCTCAATTTGA 963 0.5161 MASASASLLKSSPVLDKSEWVKGQTLRQPSASVVRCNPTTPSGLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEVNRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGIDRTYEVAQKSGQRFSSTLLRTMSFSRVFSLSLAWLHPELSPRTRPVLRRLLITPSSSFTGEFPLLSLALCFCLVDSLRLRQPSI 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2907 320 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 35 245 - -
Ssu3g2907 320 Gene3D Aldolase class I 36 264 IPR013785 -
Ssu3g2907 320 Pfam Fructose-bisphosphate aldolase class-I 54 245 IPR000741 GO:0004332|GO:0006096
Ssu3g2907 320 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 35 245 IPR000741 GO:0004332|GO:0006096
Ssu3g2907 320 SUPERFAMILY Aldolase 45 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2907 Ssu-Chr3 83897184 83899299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2907 51 245 Miscellaneous Gene Families AT3G52930 57.653 2.51e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2907 K01623 - gmx:100775844 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2907 3 83897184 83899299 Ssu3g2907 3 83897184 83899299 ECH