Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2903 ATGGCTGATATCCATAACTTGACTTGTCAAACCTGTAACAACATGGGTCTTGGTGATGGTTCTGATGGATTTTTCTACTGCCTTCGCTGTGGCTCTCAATACGAGGATGTCATGGACACTgctgttgatgatgatgatctCTTCAAAAAGGGAGGAGAAACTGGTGGCGGCGCTGTCTACTTGGCCAGTCACCAACGCCAGCGACCTGTTGCTATCAAAGCCGAACCCATCTCTCAGTATGACTCCTTCTATGATTCTCAGTCCAATTTCATCAGGAATCTGGGGTTAGAAGATGAAACTCCTCATCGAAATGGTCATGGTCAAGTTAAAACAGAGGAAATTGACACTGCTCAGTTTGATGAGGCAACTCCTTCGGTTCCTGCTGATTTTGGAGGCTCAAAAGTTGCAAGCTTTGAAGACTACCACAACGAGATAAGGATGCGGTATGTGATGGGGTTGCAGATGATGATTGAGCTTCAGTGCGAAGCATTGGTGAAGGAGTTTAAGGTTACCCCTTTAATTTGTGGCTTGGTTGGGCCAATTTGGTTGAGGTTTGTCTCCAGGACTGGTGTTTTCGATGATGACTGGGCTGATAAAGTAATCCATGACTCTGAGATGCAGAAAGAAGATGAACCAGAAGATTATAAGCCACGTGCTAAATACAGAACAGAACCCCACAATATATTTGGTCAGCGAGCTGTGATGATATGGTTTAGGTCTTTAAAGAAAAGGATTCCACTAGCTTGTACTGTTGCTGTCTCATTTCTGGCTTGTCATGTTGCCAGGGAAGCTGTCCTGCCATCTGACATGATGAAGTGGACACGTGAAGGGAAGCTTCCATATTTTTCTGCTTTTGTCGAAATTGAAAAGCGTATGGGACATCCATCAAGTACATGTCCTATTAGTTCAAGTTTTATGTTCAGGCCTCAGCGAGCTGTTCCGGTACAGAAGCTAGAGTCATTTGCTGCATCCATTGCTCAGTTCATAGGCTTAGAGTTACCTCCTGTGAACTTTTACGCAATAGCTTATCCTTATCTTCAAAAATTATCACTTCCTATTGAAAGGATTCTTCCTTATGCATGCCGCATATATGAATGGTCAATGCCTCCAGATTTGTGGTTATCCATATCCACTAATTATTTTAGGCTACCTACTCATGTATGTGTTATGTCAATTCTGGTAGTAGCAATAAGGATGTTGTACAACATAAATGGCTTTGGAGAATGGGAGAAGAGTTTGTCTCGTACTGATGATGCTAAAGACAACAGTGAAATGGGTAATGCTTTTGCCTCCAATAATGGACATGATTTTGGTAAAGAATTTAAAGATTCAGCTGAAAATCAAGTAGGACCTCAAAAACATGAATTGGATCCTGCCTGGCTTCTCCAACACCTTCAAGCAAGATATAATGAGATTGCAGATACCTATGGGTATTCAAAGGACTTGCCTACATATCTCAAATACTGTAGGGATGTTGTCTTTGCTGGATCAGAACCATCTTACGGGAATCATGAGGaagaaaatatgatagaataCCTATGGAATTTTTATCAGAATGAAGAGgACATAAAACCATCAGAAAATGTAGAGCAGTCAAATACTTCTTTTAACCAAACGAGGTCGAGGGATAAAGGATGCATTGGTAGGGACATCCAAGGtggaaaagaatag 1671 0.4069 MADIHNLTCQTCNNMGLGDGSDGFFYCLRCGSQYEDVMDTAVDDDDLFKKGGETGGGAVYLASHQRQRPVAIKAEPISQYDSFYDSQSNFIRNLGLEDETPHRNGHGQVKTEEIDTAQFDEATPSVPADFGGSKVASFEDYHNEIRMRYVMGLQMMIELQCEALVKEFKVTPLICGLVGPIWLRFVSRTGVFDDDWADKVIHDSEMQKEDEPEDYKPRAKYRTEPHNIFGQRAVMIWFRSLKKRIPLACTVAVSFLACHVAREAVLPSDMMKWTREGKLPYFSAFVEIEKRMGHPSSTCPISSSFMFRPQRAVPVQKLESFAASIAQFIGLELPPVNFYAIAYPYLQKLSLPIERILPYACRIYEWSMPPDLWLSISTNYFRLPTHVCVMSILVVAIRMLYNINGFGEWEKSLSRTDDAKDNSEMGNAFASNNGHDFGKEFKDSAENQVGPQKHELDPAWLLQHLQARYNEIADTYGYSKDLPTYLKYCRDVVFAGSEPSYGNHEEENMIEYLWNFYQNEEDIKPSENVEQSNTSFNQTRSRDKGCIGRDIQGGKE 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2903 556 PANTHER TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B 5 542 IPR033599 GO:0001164|GO:0001188|GO:0006360|GO:0070860
Ssu3g2903 556 MobiDBLite consensus disorder prediction 528 542 - -
Ssu3g2903 556 MobiDBLite consensus disorder prediction 525 556 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2903 - - gmx:100789168 995.342