Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2897 ATGGAGAAGGAGCGTGGAAACTTACTAAAAGCTCTTGGTACACAGGTTGCAGAGCCCTTAAGGGCAATGGTGGTGGGAGCTCCATTGGAGGATGCCCGGCATCTTGCTCAACGTTATGACAGAATGCGACAGGAAGCTGAAGCCCAGGCTATTGAAGTTTCTAAACGCCAGGCAAAAGTAAGAGAAATGCCACCCAATGCCGAGAATGCTATGAAATTAGAAGCAGCTGAAGCAAAGCTGCAAGATCTGAAGACAAACATGGCCATACTGGGGAAGGAAGCGGCTGCAACATTGGCTGCTGTTGAAGCACAGCAACAGAGGTTAACTCTTCAGCGTCTTATAGCTATGGTTGAAGCAGAGCGTGCCTATCATCAAATAGTCCTACAAATACTTGATCAGCTTGAGGGACAGATGATATCAGAACGACGACGAATTGAAACCCCTACTACTCCTAGTCTGGATAACAGCATGCCACCACCTCCGTCATATGAAGAAGTGAATGGTGTCTATGCTTCTCAGACACATAATGGATCAACAGATAGCATGGGTTACTTTTTGGGAGAGGTTTTATTTCCATATTCTGCTGTATCTGAAGTGGAGCTGAATCTATCAGTTGGTGATTACGTTGTTGTTCGAAAGGTTCATTGCTTTCTGCATCTgaatataactataatttacGTTGAACCAAAGAATGGCTTATCTCGTAACCCCACCCCCTTTTTCTGGTTGAGGAGGGTGCTTCTGATGGATTGCTTTGTAATTTCAACCATCATTTCACTTACGGTAacaaattag 795 0.4365 MEKERGNLLKALGTQVAEPLRAMVVGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRQAKVREMPPNAENAMKLEAAEAKLQDLKTNMAILGKEAAATLAAVEAQQQRLTLQRLIAMVEAERAYHQIVLQILDQLEGQMISERRRIETPTTPSLDNSMPPPPSYEEVNGVYASQTHNGSTDSMGYFLGEVLFPYSAVSEVELNLSVGDYVVVRKVHCFLHLNITIIYVEPKNGLSRNPTPFFWLRRVLLMDCFVISTIISLTVTN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2897 264 SUPERFAMILY BAR/IMD domain-like 1 138 IPR027267 -
Ssu3g2897 264 Coils Coil 66 93 - -
Ssu3g2897 264 Coils Coil 100 120 - -
Ssu3g2897 264 PANTHER SH3 DOMAIN-CONTAINING 1 214 - -
Ssu3g2897 264 Coils Coil 29 56 - -
Ssu3g2897 264 Gene3D Arfaptin homology (AH) domain/BAR domain 1 148 IPR027267 -
Ssu3g2897 264 PANTHER PROTEIN, PUTATIVE-RELATED 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2897 Ssu-Chr3 83774664 83776368 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2897 - - gmx:100777051 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2897 3 83774664 83776368 Ssu3g2897 3 83774664 83776368 ECH