Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2891 ATGGCATTTAAACTCTCATCGGTACCTCTCCCTACCTCTCCCCGCCAAAATCCTAATTCCACACTTTCAATCCATCGCCTTCCTCGTCGTTTCTTTCCATCTTCCCTTCCTCCCAATTTGTGCCTCTCAAGCGCAGCCTCAGCCTCCACATTCCATCACACTGGCTTCGTTACCGCTCGCGCATTCCGAAGCCAAGGCGAAGCCCAAATCAGTGACGTTTTCGAAGAAGAAGACAAAGACGAAGAAATATCGAGGCAGGGTGAGAAAAATGAACTAGCGAAGCAGGGCATATGGAGTCAGATAAAGGAAATTGTGATGTTTACAGGACCAGCTACCGGACTTTGGATATGTGGACCGCTCATGAGTCTCATAGATACTGCAGTCATTGGTCAGAGAAGCTCAATAGAGCTTGCTGCTTTAGGTCCTGCTACAGTTGTTTGTGATTACATGAGCTACGTGTTCATGTTTCTATCAATTGCTACTTCCAATATGGTTGCCACTGCCCTTGCCAAACAGGACAAAGAAGAAGTACAGCATCACATATCTGTCTTGCTTTTTGTTGGGTTATCTTGTGGCTTTGTGATGCTTTTGTTCACAAGGCTATTTGGTGCTGCAATAATAACTGCTTTCACTGGGCCAAAGAATGCACATGTAGTACCTGCAGCTAGCAATTATGTAAAGattcgAGGCTTGGCATGGCCCGCTTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCCTTGGGACCCTTGAAGTCTTTGGCTGCTGCTACTGTTATAAATGTCATTGGTTGTATACTTTTGTGCAACTGGTTAGGCTATGGAATTGTAGGGGCTGCATGGGCTACAATGGTTTCACAAGTTGTTGCTGCTTACATGATGATTCAAACTCTAAACAGGAAGGGATATAATGCACTTGCCTTCTCCATTCCTTCAGGGAAGGAACTTCTGATGATACTTGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTTGTCTCAAGTATTATACTAGATCTGTAG 1044 0.4444 MAFKLSSVPLPTSPRQNPNSTLSIHRLPRRFFPSSLPPNLCLSSAASASTFHHTGFVTARAFRSQGEAQISDVFEEEDKDEEISRQGEKNELAKQGIWSQIKEIVMFTGPATGLWICGPLMSLIDTAVIGQRSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKEEVQHHISVLLFVGLSCGFVMLLFTRLFGAAIITAFTGPKNAHVVPAASNYVKIRGLAWPALLVGWVAQSASLGMKDSLGPLKSLAAATVINVIGCILLCNWLGYGIVGAAWATMVSQVVAAYMMIQTLNRKGYNALAFSIPSGKELLMILGLAAPVFMTMMSKVVSSIILDL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2891 347 Pfam MatE 118 271 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ssu3g2891 347 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 74 340 IPR044644 -
Ssu3g2891 347 PANTHER PROTEIN DETOXIFICATION 74 340 - -
Ssu3g2891 347 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2891 Ssu-Chr3 83692278 83694936 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2891 K03327 - gmx:100778835 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2891 3 83692278 83694936 Ssu3g2891 3 83692278 83694936 ECH