Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2889 ATGGCGGCAGTAGCAGTGGCATCCTCTCATGTAATGTTCGTTCTTCgttcacaaccatcatcaccaccaccctcttcttcttctttcttttcctttctcaaaCCTCTTCTTATTTCCTCTCCCAATGCCGTATCTGCGCCCCTTCGACAGATCCATGTTCCACCGCTTCGAAAATCTTTCTTTACCTCTTTCTTCTCTACtccctcctctttctcttcccttGCCGTTTCTCAAGACGGCGAAGAAACAGAGATTGCGGGTGATGAATTGGATTCAAGCACGTCGCCGTTGGAGAGAAAGAGGGACGAAAGACTGAAGTTGGAGGTGCCGAGTCTCACtatgaaggaaaagaaagagctTGCGTCTTATGCTCACAGTTTGGGGGATAAGCTGAAGACCCAGTTGGTGGGAAAGTCTGGCGTTACCTCCAATGTTGCCACATCTTTCGTTGAGACCCTTGAAGCCAACGAGCTTCTCAAGATTAAAATACATAGGAGCTGTCCAGGTGAGTTAGATGATGTGGTGAAGCAGTTGGAAGAAGCAACTGGTTCAGTGGCTGTTGGTCAGATTGGTCGAACTCTGATTATATACAGGCCCAGTCTCTCCAGATTGAAGgcagaagaaaagaagaaacaagtTCGTAGCCTTATTCTGGAAAAACAACCTAAACCAAGACTGGTAAACAAGAGTAAGGAACAATTACCCAAATTATCACGGCGTGGTTCATCGTGGAAAGCAAGAAACAGTAGGTCATAA 756 0.3942 MAAVAVASSHVMFVLRSQPSSPPPSSSSFFSFLKPLLISSPNAVSAPLRQIHVPPLRKSFFTSFFSTPSSFSSLAVSQDGEETEIAGDELDSSTSPLERKRDERLKLEVPSLTMKEKKELASYAHSLGDKLKTQLVGKSGVTSNVATSFVETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSLSRLKAEEKKKQVRSLILEKQPKPRLVNKSKEQLPKLSRRGSSWKARNSRS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2889 251 Pfam CRS1 / YhbY (CRM) domain 112 198 IPR001890 GO:0003723
Ssu3g2889 251 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 1 247 - -
Ssu3g2889 251 SUPERFAMILY YhbY-like 112 200 IPR035920 -
Ssu3g2889 251 SMART CRS1_YhbY_2 112 198 IPR001890 GO:0003723
Ssu3g2889 251 MobiDBLite consensus disorder prediction 215 238 - -
Ssu3g2889 251 Gene3D - 111 214 IPR035920 -
Ssu3g2889 251 ProSiteProfiles CRM domain profile. 110 209 IPR001890 GO:0003723
Ssu3g2889 251 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 1 247 - -
Ssu3g2889 251 MobiDBLite consensus disorder prediction 215 251 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2889 K07574 - gmx:100779359 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2889 3 83687118 83688721 Ssu3g2889 3 83687118 83688721 ECH