Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2887 ATGTCCCTCGGAAACGGAAATAATAAGAAAGCAGAAGTGAGTGTGGGAGCAGGTGAAAGGCTCTATCTCGGGTTGGACTTTGGCACATCCGGTGCCAGGTTTGCCATTATTGACAAGGATGGGACAATTCAGGCTGAGGCAAAGAGAGAGTATCCGCTGTACTTGAGTGGAGAGTCACATGATTGGGTACGCTCGTGGAAGGAGACACTGTTTTCGCTGCTTGAAGATGTCCCACTTGACCTTCGCAAACACGTTGTGTCCATTTCTATTGATGGGACTTCTGCAACTACTATCATTGTTGATAGTTACACAGGGGAACCGTTGTGGAGACCTTTTCTTTACAACGAGAGTTGTGCTGATGCACTACCAATGGTGAAATCTATTGCTCCTCCAAACCATACGGTTTGCACTGGGTCATCCACTCTGTGTAAACTCGTTTCGTGGTGGATCCATGTTGGTTCTAACAAAAAACCTGCTCTGTTGTTGCACCAAGCGGATTGGCTTTTGTGGCTTCTTCATGGAAAGCTTGGAGTTACAGATTATAATAATGCTCTCAAGgtTGGCTATGATCCTGAAGTGGACTCATATCCTTCATGGCTAGTCTGTCAACCATATTATCATCTTTTACCTTCAGTTGTTGCTCCGGGAACTCCAATTGCTTGTTTAAAGGAGGaacttagaaataaatatgGTTTTCAAAAGGACTGTGTTGTATGCACGGGAACCACTGATAGTATAGCTGCATTTCTTGCAGCTCGTGCTACTCAACCTGGCAAAGCTGTCACTTCATTGGGTTCAACACTAGCTATTAAACTACTCAGCAACACAAGAATTGAGGATTCTCGGTTTGGGGTGTACAGCCATCGCCTTGATGATAAATGGCTTGTTGGTGGTGCTTCAAACACTGGTGGAGCCATTCTTAGACAGCTGTTCACCGATGATCAATTAGGGAAACTGAGTGAACAGATCAATCCCTCACAACCTTCTCTTCTGGACTACTATCCTCTGCCTAAAGCAGGTGAAAGATTCCCAGTAGCAGATCCTAATTTGGCTCCAAGGTTACTTCCACGTCCAGAAAATGATGTTGAGTACTTGCATGGGATTTTAGAATCCATTGCGCGTATAGAGGCAAAGGCATATGGGTTGTTAAAGGAGCTAGGAGCAACCCAGGTAGACGAAGTTTTCACAGCCGGTGGAGGAGCCAAAAATGAGAAGTGGATAAAGATACGAGAGAGGGTGCTTGGTTTGCCTGTGCGTCGTGCAAATCAAACAGAAGCTGCCTACGGAGCTGCATTATTGGCAATAAAGGCTTTTTTGGATTAG 1323 0.4475 MSLGNGNNKKAEVSVGAGERLYLGLDFGTSGARFAIIDKDGTIQAEAKREYPLYLSGESHDWVRSWKETLFSLLEDVPLDLRKHVVSISIDGTSATTIIVDSYTGEPLWRPFLYNESCADALPMVKSIAPPNHTVCTGSSTLCKLVSWWIHVGSNKKPALLLHQADWLLWLLHGKLGVTDYNNALKVGYDPEVDSYPSWLVCQPYYHLLPSVVAPGTPIACLKEELRNKYGFQKDCVVCTGTTDSIAAFLAARATQPGKAVTSLGSTLAIKLLSNTRIEDSRFGVYSHRLDDKWLVGGASNTGGAILRQLFTDDQLGKLSEQINPSQPSLLDYYPLPKAGERFPVADPNLAPRLLPRPENDVEYLHGILESIARIEAKAYGLLKELGATQVDEVFTAGGGAKNEKWIKIRERVLGLPVRRANQTEAAYGAALLAIKAFLD 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2887 440 Gene3D - 248 439 - -
Ssu3g2887 440 Pfam FGGY family of carbohydrate kinases, N-terminal domain 21 250 IPR018484 GO:0005975|GO:0016773
Ssu3g2887 440 Gene3D - 18 247 - -
Ssu3g2887 440 PANTHER D-RIBULOSE KINASE 20 437 - -
Ssu3g2887 440 PANTHER SUGAR KINASE 20 437 - -
Ssu3g2887 440 PIRSF GlpK 19 438 IPR000577 GO:0005975|GO:0016301
Ssu3g2887 440 SUPERFAMILY Actin-like ATPase domain 21 249 IPR043129 -
Ssu3g2887 440 Pfam FGGY family of carbohydrate kinases, C-terminal domain 290 437 IPR018485 GO:0005975|GO:0016773
Ssu3g2887 440 SUPERFAMILY Actin-like ATPase domain 256 437 IPR043129 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2887 K22935 - gmx:100779892 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2887 3 83657422 83661521 Ssu3g2887 3 83657422 83661521 ECH