Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2856 ATGGCAGCCCGTCAATTGAATTCCAAATCCCATTTCCATGCTCGTTCAAACAGCTTGCCCTCTAGACCACACCCTCTCATCCTACAATGCAATGACCACTTGGACAGGTTAGGGGCTTCCCATGAAACCACCTCTTCCTCTTCATTGCTTAGTCATAAGCTAGCAGGGTTGCAAGATCTGCATGAATGTGTTGAAAAATTGTTCCAGCTTCCCCTCACGCAAGAAGCACTTCACCGTGAGCGTCAAGAGAAGTGGGTAGATCAGCTTCTCAATGGATCCTTAAGGCTCTTAGATGTGTGCACAGCTGCCAAAGACTCTCTACTGCATACAAAAGAGTGCATGCGTGAACTTCAATCAATTATGAGAAGGAGAAAGGGAGGTGAAGTGGAGCTCAGGGCAGAGATTAAGAAGTTCTTGACTTCCAGGAAGGTGGTAAAAAAGGCCATCTCAAAAGCCTTGGCAAATTTGAAGGGTACTACAAAAAATTGCAACATCTCATCCACAAACGAAGACAATCAAACAGTAGCTTTGATTAGCTTATTAGAGAACGTGGAAGTGGTCACTCTATCAACATTTCAGGGACTACTGCAATTCATCTCAGGGACTACACAATCAAAGTCAAGCAGCTGGATTTTGGTTTCCAAGCTAATGCAGGGCAAGAAAATAGGTTGCTCACAATTGGCAGATGAAAGTGAATTTGCCCAACTTGACGAAGCATTGCAATCCTGCATGTTTTCCCAGACAAGTAAATCTGAAAACATGAATAAGCTGCAAAACCAATTGGAGAAAGTGGAGTCGCTTGTTCAAGATCTTGAAGAAGGTTTTGAGTTTCTGTTTAGGCGTTTGATAAAGACTAGAGTTGCCCTTCTTAACATCCTCAATCACTAG 888 0.4324 MAARQLNSKSHFHARSNSLPSRPHPLILQCNDHLDRLGASHETTSSSSLLSHKLAGLQDLHECVEKLFQLPLTQEALHRERQEKWVDQLLNGSLRLLDVCTAAKDSLLHTKECMRELQSIMRRRKGGEVELRAEIKKFLTSRKVVKKAISKALANLKGTTKNCNISSTNEDNQTVALISLLENVEVVTLSTFQGLLQFISGTTQSKSSSWILVSKLMQGKKIGCSQLADESEFAQLDEALQSCMFSQTSKSENMNKLQNQLEKVESLVQDLEEGFEFLFRRLIKTRVALLNILNH 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2856 295 MobiDBLite consensus disorder prediction 1 25 - -
Ssu3g2856 295 MobiDBLite consensus disorder prediction 1 17 - -
Ssu3g2856 295 PANTHER DUF241 DOMAIN PROTEIN 1 294 - -
Ssu3g2856 295 Coils Coil 247 274 - -
Ssu3g2856 295 Pfam Protein BPS1 53 292 IPR004320 GO:0048364|GO:0048367
Ssu3g2856 295 PANTHER BPS1-LIKE PROTEIN 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2856 Ssu-Chr3 83168061 83168948 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2856 - - gmx:100802945 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2856 3 83168061 83168948 Ssu3g2856 3 83168061 83168948 ECH