Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2855 ATGGCAGCCTCTCAATTAAACACAAAATCCCATTTCCATGCTCGTTCAAACAGTTTGCCCTCTAGACCACACCCTCTCATCCTACAATGCAATGACCACTTGGACAGGTTAAGGGCTTCCCATGAaacctcctcttcctcttcattGCTTAGCCATAAGATAGCAGGGTTGCAAGCTCTGCATGAATGTGTTGAAAAGTTGTTCCAGCTTCCCCTCACCCAAGAAGCACTTCACCATGAGCGTCAAGAAAACTGGGTAGATGAGCTTCTCGATGGATCCTTAAGGCTCCTAGATGTGTGCACAGCCGCCAAAGACTCTCTACTGCATACAAAAGAGTGCATGCGTGAACTTCAATCAATTAtgagaaggagaaaaggagGTGAAGTGGAGCTCAGGGCAGAGATTAAGAAGTTCTTGACTTCCAGGAAGGTGGTAAAAAAGGCCATCTCAAAAGCCTTGGCAAATTTGAAGGGTACTACAAAAAGTTGCAACATGTCATCTACAAATGAAGACAATCAAACGGTAGCTTTGATTAGCTTATTAGAGAAAGTGGAAGTGGTCACTCTATCAACATTTCAGGGACTACTGCAATTCATCTCAGGGACTACACAATCAAAGTCAAGCAGCTGGATTTTGGTTTCCAAGCTAATGCAGGGCAAGAAAATAGGTTGGTCACAATTGGCAGATGAAAGTGAATTTGCCCAACTTGATGAAGCATTGCAATCCTGCATGTTTTCCCAGACAAGTAAATCTGAAAACATGAATAAGCTGCAAAACCAATTGGAGAAATTGGAGTTGCTTATTCAAGATCTTGAAGAAGGGCTTGAGTTTCTGTTTAGGCGTTTGATTAAGATTAGAGTTGCCCTTCTTAACATCCTTAATCACTAG 888 0.4054 MAASQLNTKSHFHARSNSLPSRPHPLILQCNDHLDRLRASHETSSSSSLLSHKIAGLQALHECVEKLFQLPLTQEALHHERQENWVDELLDGSLRLLDVCTAAKDSLLHTKECMRELQSIMRRRKGGEVELRAEIKKFLTSRKVVKKAISKALANLKGTTKSCNMSSTNEDNQTVALISLLEKVEVVTLSTFQGLLQFISGTTQSKSSSWILVSKLMQGKKIGWSQLADESEFAQLDEALQSCMFSQTSKSENMNKLQNQLEKLELLIQDLEEGLEFLFRRLIKIRVALLNILNH 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2855 295 MobiDBLite consensus disorder prediction 1 24 - -
Ssu3g2855 295 MobiDBLite consensus disorder prediction 1 17 - -
Ssu3g2855 295 PANTHER BPS1-LIKE PROTEIN 1 294 - -
Ssu3g2855 295 Coils Coil 247 281 - -
Ssu3g2855 295 Pfam Protein BPS1 54 292 IPR004320 GO:0048364|GO:0048367
Ssu3g2855 295 PANTHER DUF241 DOMAIN PROTEIN 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2855 Ssu-Chr3 83161927 83162814 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2855 - - gmx:100802945 465.692