Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2846 ATGCAGTTAACCGATCAATATAAGGTCATTTCTGCTATTAAGGAAGCAGGAAATGTTAAGAGGTTCTTTCCTTCAGAGTTTGGAAATGATGTGGATCGGAACCATGCCGTggatgaaggaaagaaaattttcgACGATAAAGCCCAAATACGCCGAACCATTGAGGACCTAGGAATTCCGCATACCTATGTCGTGGCCAACTTTTTTACTAGACACTTCCTACCCACTTGGTCAGATCTTGGAGCCACGACTGGCTCAATGGATACGATTATTATTCTTGGGGACGGAAACACCAAAGTTGTTCTTAATACGGAAGAGGATATTGCCACTTATACCATTAGAACTGTTGATGATCCAAGAACCCTGAACAAAATTCTCTACATCCGACCCCCAGCTAACACCTTGTCATATAATGACCTAGTATCTCTCTGGGAGAAGAAGAATGGTAAAATCCTTAAAAGAGACTACGTTCCTGAAGAGCAACTTTTGAAGTATATTAAAGAGTCTTCATTTCCCATCAATATGGGCCTGTCAATTTGCCACGCTGCGTATGTGAAAGGAGATCACACAAACTACGAAATTAAGCCCTCATTTGGAGTTGAAGCTTCAGAACTCTATCCTGATGTTAAATACACCACTTTGGACAAGTTCTTCGATGACAATAATGCTTGCACCCCATTTTACTTGAACCAGCTTATACACATTAATGATATCTag 717 0.3933 MQLTDQYKVISAIKEAGNVKRFFPSEFGNDVDRNHAVDEGKKIFDDKAQIRRTIEDLGIPHTYVVANFFTRHFLPTWSDLGATTGSMDTIIILGDGNTKVVLNTEEDIATYTIRTVDDPRTLNKILYIRPPANTLSYNDLVSLWEKKNGKILKRDYVPEEQLLKYIKESSFPINMGLSICHAAYVKGDHTNYEIKPSFGVEASELYPDVKYTTLDKFFDDNNACTPFYLNQLIHINDI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2846 238 Gene3D - 66 217 - -
Ssu3g2846 238 PANTHER PINORESINOL REDUCTASE-RELATED 2 219 - -
Ssu3g2846 238 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 178 IPR036291 -
Ssu3g2846 238 Pfam NmrA-like family 1 173 IPR008030 -
Ssu3g2846 238 Gene3D - 2 206 - -
Ssu3g2846 238 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 2 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2846 Ssu-Chr3 83057490 83059933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2846 K23050 K13266 pvu:PHAVU_011G044500g 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2846 3 83057490 83059933 Ssu3g2846 3 83057490 83059933 ECH