Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2827 ATGAGAATTCCATATCTTGGCGAAAAAATGAAGTCCATCTTTGCTTTTTTCGTAGTATTCTCTCTTCTCATGGTTGTCAACCTCAGCTATGCAAGAAAAGACCTGGGAGACTATTGGAAGAATATGATGAATAGCCAACCTATGCCTGAAGCAATCAAAGACCTCCTTGTTCAAGATCCACAAGTATCAGAAGCAGTGAAGGATCATTTTATTCGCGACTTTGATATAAGGCCTAATGTCATATTATATCACACACATGTTGTGTCCAACAAGCAGAAGCAGAAGCAGCAGGCCATGGTCAAGAAAATAGAACCAGAGTTTCAAGGAACAGGAAAACATGGTTGA 345 0.3971 MRIPYLGEKMKSIFAFFVVFSLLMVVNLSYARKDLGDYWKNMMNSQPMPEAIKDLLVQDPQVSEAVKDHFIRDFDIRPNVILYHTHVVSNKQKQKQQAMVKKIEPEFQGTGKHG 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2827 114 Pfam Organ specific protein 33 62 IPR024489 -
Ssu3g2827 114 PANTHER PROTEIN, PUTATIVE-RELATED 10 104 - -
Ssu3g2827 114 PANTHER PROTEIN, PUTATIVE-RELATED 10 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2827 Ssu-Chr3 82728782 82729229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2827 - - gmx:100306585 193.741