Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2819 ATGGCTTTACCCGAGGTTGGGTTGAGACTGCTCCTTTCCCCCGTTAATTCCAACCTTGTTGCCCGGGCAGCATGCTGTTCTGTAGGGCTTGCACTTCCCGTGTATTCCACCTTTAAAGCTATTGAGAACAATGACCCATATGAACAACAAAGGTGGCTACTGTATTGGGCagCCTATGGATCTTTTAGTGCTGCAGAAATGTTTGCTGAAAAATTACTTTCCTGGATTCCACTCTATTATCACGTGAAGTTTGCATTTCTTCTTTGGCTACAGCTTCCCAATATCAATGGTGCAAGACAACTGTATTCTAGTCACTTGCGTCCATTCCTGTTGAAGCATCAAGCTAGAATGGATCTGATTGTCGAATTTGTGTATGGTGAAATGAGTAAAATTATTAGTAGATACCAACCAGAATTGCAATTTGCAAGAACTCTTGTAGTGAAGTTTTTAATGACAGCAACTCAGACGATTAGGAATCTCATTCATCCAGTTGGGAGGGAGTCAAATCGCGTTGAACCCCAAAAGAGGCAGGATCAGGATTCAGAAtcagaagaaaataattga 564 0.4096 MALPEVGLRLLLSPVNSNLVARAACCSVGLALPVYSTFKAIENNDPYEQQRWLLYWAAYGSFSAAEMFAEKLLSWIPLYYHVKFAFLLWLQLPNINGARQLYSSHLRPFLLKHQARMDLIVEFVYGEMSKIISRYQPELQFARTLVVKFLMTATQTIRNLIHPVGRESNRVEPQKRQDQDSESEENN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2819 187 MobiDBLite consensus disorder prediction 167 187 - -
Ssu3g2819 187 MobiDBLite consensus disorder prediction 168 187 - -
Ssu3g2819 187 PANTHER HVA22-LIKE PROTEIN 4 185 - -
Ssu3g2819 187 Pfam TB2/DP1, HVA22 family 33 109 IPR004345 -
Ssu3g2819 187 PANTHER HVA22-LIKE PROTEINS 4 185 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2819 Ssu-Chr3 82532988 82535533 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2819 K17279 - gmx:100802071 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2819 3 82532988 82535533 Ssu3g2819 3 82532988 82535533 ECH