Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2818 ATGATTGGGCGCAGAGATAGAGAGGGACCCTTGATGAGGAACAACAGCACAAACTCTCTACGCAAATCCAGGGTCGTAACTGCAGTGGCAATTGGGGTTCTAATTGGATGCGTCTTCGCTTTCTTGTTCCCCAATGGCTTCTTCGTTTCTGACTCTGTTACACCTAATCGCAATCTCCCTCTCGCGGGATCCAAGACCCAGGAAAATTCAGCTGGATGTGAATCCTCGGATCGGGTCAACATGTTGAAATCAGAGTTTGTGGCAGTATCAGAGAGAAATGCTGAGCTGAAGAAACAGGTGAGGGAATTAACTGAAAGGCTTCGGCTCGCAGAGCAAGGGAAAGACCAGGCTCAAAAGCAGTTCCTTACATTAGGTAAACAGTATAAAGCTGGACCTTTTGGTACTGTAAAGGGATTAAGAACCAACCCTACTGTTGTTCCTGATGAATCTGTGAACCGAGGTTGGCAAAGATATTAG 477 0.4654 MIGRRDREGPLMRNNSTNSLRKSRVVTAVAIGVLIGCVFAFLFPNGFFVSDSVTPNRNLPLAGSKTQENSAGCESSDRVNMLKSEFVAVSERNAELKKQVRELTERLRLAEQGKDQAQKQFLTLGKQYKAGPFGTVKGLRTNPTVVPDESVNRGWQRY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2818 158 Coils Coil 79 120 - -
Ssu3g2818 158 PANTHER ARABINOSYLTRANSFERASE RRA3 13 152 IPR044290 GO:0016757|GO:0080147
Ssu3g2818 158 PANTHER ARABINOSYLTRANSFERASE RRA1-RELATED 13 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2818 Ssu-Chr3 82529484 82530789 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2818 K20783 - gmx:100804189 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2818 3 82529484 82530789 Ssu3g2818 3 82529484 82530789 ECH