Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2815 ATGGGGAAAGGAGGTGGTTGCTTTCCAAGCAAGACAAAGGCACCAATTTCCGAAGCAGAAAAGAATGATCCTGTTAGTGTTGAAAGCCTAATCCCAAGAAATGATAAAAGTAGCACAAGCCAAGAGGGGCCAGCACCTGAAGCAGTGAAAAAGCTGAAAGTTTTCATAGTGTTCTACTCAACTTATGGCCATGTGGAGTCATTGGCAAGGTCCTTGAAGAAAGGGGTTGATTCAATAGAAGGAGTTGAAGGGGTGTTGTACCGTGTGCTGGAGACACTGCCTAAGGAGGTTTTGCAACTCATGAAGGCACCTGAGAAGGATGACAAGGTGCCACTCATATCTGCTGAGGAGTTGGTGGAGGCTGATGGGCTGCTGTTTGGATTTCCAACAAGGTATGGAAGCATGGCGGCGCAGATGAAGGCGTTTTTCGATTCGACTGGTCAGTTGTGGAGAGAGCAGAAGCTGGCAGGGGTGCCTGCTGGCTTCTTTGTCAGCACTGGCACTCAGGGTGGAGGTCAAGAAACCACAGCTTGGACAGCAATCACACAGTTAGTCCACCATGGGATGCTCTATGTTCCTATTGGTTATACCTTCGGTGCTGGAATGTTCGAAATGGATTCAATCAGAGGTGGATCTCCATATGGTGCTGGAGTTTTTGCTGGCGATGGATCAAGGCAAGCAAGTGAAGCAGAACTGGCCCTTGCTGAGTATCAAGGAAGGTACATGGCCACAATAGTCAAGAAGTTAGGCCAGAAAAGCTAG 762 0.4843 MGKGGGCFPSKTKAPISEAEKNDPVSVESLIPRNDKSSTSQEGPAPEAVKKLKVFIVFYSTYGHVESLARSLKKGVDSIEGVEGVLYRVLETLPKEVLQLMKAPEKDDKVPLISAEELVEADGLLFGFPTRYGSMAAQMKAFFDSTGQLWREQKLAGVPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLYVPIGYTFGAGMFEMDSIRGGSPYGAGVFAGDGSRQASEAELALAEYQGRYMATIVKKLGQKS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2815 253 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 4 253 - -
Ssu3g2815 253 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 53 249 IPR010089 GO:0003955|GO:0010181
Ssu3g2815 253 PANTHER NAD(P)H:QUINONE OXIDOREDUCTASE, TYPE IV PROTEIN 4 253 - -
Ssu3g2815 253 SUPERFAMILY Flavoproteins 53 249 IPR029039 -
Ssu3g2815 253 Gene3D - 50 250 IPR029039 -
Ssu3g2815 253 ProSiteProfiles Flavodoxin-like domain profile. 54 242 IPR008254 GO:0010181
Ssu3g2815 253 Pfam NADPH-dependent FMN reductase 68 194 IPR005025 GO:0016491
Ssu3g2815 253 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2815 Ssu-Chr3 82482181 82483806 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2815 K03809 - gmx:100809530 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2815 3 82482181 82483806 Ssu3g2815 3 82482181 82483806 ECH