Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2813 ATGGAGGCATACAAGAAGGTGATGATTGTAGGGATGTTGTTGGCCATTGTGATGATTGGGTCAGGGCCCATGTTGGCCAATGGTCAATACTCCTTTTGTCATATGCCCAAAGACGGGTTGAAGGCATGTCTGCCCAGTGTGAGTGGGGACAATCCTGTTGATCCTTCCACTGCTTGTTGCTCAGCCATTGCCAAGGCTGATCTTCAATGCTTCTGTCGTTACAAGGATTCGGGCTTGCTTCCTATCTATGGTGTTGATCCCAACGAAGCCATGCAACTCCCAGTTAAGTGCAAGGTTGTGGACTCTTTCCACTGCTAG 318 0.4906 MEAYKKVMIVGMLLAIVMIGSGPMLANGQYSFCHMPKDGLKACLPSVSGDNPVDPSTACCSAIAKADLQCFCRYKDSGLLPIYGVDPNEAMQLPVKCKVVDSFHC 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2813 105 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 103 IPR036312 -
Ssu3g2813 105 Pfam Probable lipid transfer 18 104 IPR016140 -
Ssu3g2813 105 PANTHER LIPID BINDING PROTEIN-RELATED 6 105 IPR039265 GO:0005504|GO:0009627
Ssu3g2813 105 PANTHER LIPID TRANSFER PROTEIN 6 105 - -
Ssu3g2813 105 SMART aai_6 33 105 IPR016140 -
Ssu3g2813 105 Gene3D - 30 105 IPR036312 -
Ssu3g2813 105 CDD nsLTP_like 33 105 IPR044741 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2813 7 105 Acyl Lipid Metabolism Gene Families AT5G48490 35.354 3.26e-17 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2813 - - aprc:113865173 187.578