Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2812 atgggGACTCATATGAGCAAGAAGATCCCTGAAACTTCTTCTTCTGTTGGCCTCAACACTGAATTGCACTATAAAACTGAGTTGAGTTCTTATGAGGCTGCTTGCAAGCTTGATTTTGATTTGCAGTCCTTTGACACCACACTTCAAGCTAGAACAAATCAGGTTATCAATACTCTTGCTGTTGGTGTTGAAGTTCGGGCACTTTCATTTGATTCTCTAAAACAAGTCACAGAATGCCTTCTGGAGATGAACCAGGAAGTTGTGAAGGTAATCTTAGACTGCAAGAAAGACATATGGAAGAGCCAGGAACTGTTTGAACTGGTTGAGGAATACTTTGAGAATAGTCTGCAAACTTTAGACTTCTGCACTGCATTGGAGAAGTGCGTAAAGCGAGCCCGCGACAGCCAGTTGCTCATCCTTGTGGCTCTTCAACAGTTTGAGGAGGAATCAGGGTTGGGAGACAACCGCTTTATGAGAACATTGCAAGAACTGAAGAATTTCAAGGCTGCTGGTGACCCTTTCACTGAAGAATTCTTCCAGATCTTTCAATCTGTTTATAGGCACCAGATATTCATGCTTGAGAAGTTGCAACTTAGGAAGAACAAGCTTGATAAGAAACTAAGATACATCCATTCTTGGAGGAAGGTTTCGAGCATGATATTTGTGGCTACATTTGCTGCTGTCTTGATCTGCTCGGTTGTAGCAGCAGCTATCGCAGCACCGCCTGTTGCTGCTGCGATAGCTGCTGCTACGTCAATCCCAATTGGATCCATGGGGAAGTGGATTGACTCCCTCTGGAGGAACTATGAAAATGCACTGAAAGGGCAGAAGGAAGTGATTAGCTCAATGCAGGCTGGTACCTATGTTGCTATAAAGGACTTGGACAGCATTCGGATTCTTGTTGATCGGCTAGAAATTGAGATTGAATCTCTATTGCATAATGTGGATTTTGCCATTGAGGAAGAAGCTGTGAAGGTTGCAATAGAGGAGATCAAGAAGAAGCTTGGAGTGTTTATGAAGAATGTTGAAGATTTAGGAGCTCAAGCTGATGTGTGTAGCCGTGACATTAGGAGGGCAAGGACTGTGGTCCTGCAGAGAATCATAAAGCATCCCCACAATTGA 1122 0.434 MGTHMSKKIPETSSSVGLNTELHYKTELSSYEAACKLDFDLQSFDTTLQARTNQVINTLAVGVEVRALSFDSLKQVTECLLEMNQEVVKVILDCKKDIWKSQELFELVEEYFENSLQTLDFCTALEKCVKRARDSQLLILVALQQFEEESGLGDNRFMRTLQELKNFKAAGDPFTEEFFQIFQSVYRHQIFMLEKLQLRKNKLDKKLRYIHSWRKVSSMIFVATFAAVLICSVVAAAIAAPPVAAAIAAATSIPIGSMGKWIDSLWRNYENALKGQKEVISSMQAGTYVAIKDLDSIRILVDRLEIEIESLLHNVDFAIEEEAVKVAIEEIKKKLGVFMKNVEDLGAQADVCSRDIRRARTVVLQRIIKHPHN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2812 373 PANTHER UPF0496 PROTEIN 3-RELATED 1 370 IPR007749 -
Ssu3g2812 373 Coils Coil 294 321 - -
Ssu3g2812 373 PANTHER UPF0496 PROTEIN 1 1 370 - -
Ssu3g2812 373 Pfam Protein of unknown function (DUF677) 41 367 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2812 Ssu-Chr3 82458099 82459220 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2812 - - gmx:100811667 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2812 3 82458099 82459220 Ssu3g2812 3 82458099 82459220 ECH