Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2811 ATGGCTGTTCTTCCTCTTGTAAGTTCATGTTTTGGAGCAAAGTATCATGCTCTAGCTCCATTGAGAATTGTAAGGGGTCTGGTGTGTCTACTGGTGCTGCTTTCAACAGCATTTATAATGTTAGTGTTCTTTGGCTTTATAAGTGCTGTTATAGTGCGACTTTTTAGCATCAGTTACAGCCGAAAAGCAACTTCCTTTTTGTTTGGTGCTTGGCTAGCCTTGTGGCCTTTTCTATTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGATATTGTTCCTTCAGGAGAACGGATCTTACTGATCGCTAATCATAGAACTGAGGTTGACTGGATGTATTTATGGGACCTTGCCTTGCGGAAGGGATGCCTtggatacataaaatatatacttaagaGCAGCTTGATGAGACTCCCAGTTTTTGGTTGGGCATTTCACATACTAGAGTTCATCCCAGTGGAAAGAAAGTGGGAGGCTGATGAGTCAATCATGCGTCATATGCTTTCAACATTCAAGGATCCCCAAGATCCTCTCTGGCTTGCTCTTTTCCCAGAAGGCACTGATTTTACTGAGCAAAAGTGCCTTCGTAGTCAAAAATATGCCGCTGAACATGGGTTACCAATTctgaaaaatgttttacttcCAAAGACAAAGGGCTTCTGCGCCTGCTTGCAAGAGTTGAGGGGCTCTCTCACTGCAGTTTATGATGTGACCATTGGCTACAAATATCGCTGCCCATCTTTCTTGGACAATGTCTTTGGGGTGGATCCTTCTGAAGTTCATATTCATATCTGCCGTTTCCCCCTTGATAGTATCCTGGTATCTGAAGACGAAATGTCAATGTGGTTGATAAATAGATTCCAGTTGAAGGATCGGTTACTTTCCAATTTTCAAACTCAAGGTCAGTTTCCTGATCAAGCAACAGAAAAGGGCCTCTCTACTGTGAAGAGCATTTTAAATTGTATGACAATTCTCATATTGACTGGTACATGCATGTACTACAGTTTTTCCTCTGTCTGGTTTAAACTTTATGTGTACTTAGTCTGTGCTTATTTGGTTCCGGCCACGTATTTCAATATTCGGCCGCAGCCAATTCTTAGCTTTTTGAAGATGAGATCAAATTGCCACCcctcaacaaatacttga 1149 0.3986 MAVLPLVSSCFGAKYHALAPLRIVRGLVCLLVLLSTAFIMLVFFGFISAVIVRLFSISYSRKATSFLFGAWLALWPFLFEKINKTKVVFSGDIVPSGERILLIANHRTEVDWMYLWDLALRKGCLGYIKYILKSSLMRLPVFGWAFHILEFIPVERKWEADESIMRHMLSTFKDPQDPLWLALFPEGTDFTEQKCLRSQKYAAEHGLPILKNVLLPKTKGFCACLQELRGSLTAVYDVTIGYKYRCPSFLDNVFGVDPSEVHIHICRFPLDSILVSEDEMSMWLINRFQLKDRLLSNFQTQGQFPDQATEKGLSTVKSILNCMTILILTGTCMYYSFSSVWFKLYVYLVCAYLVPATYFNIRPQPILSFLKMRSNCHPSTNT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2811 382 SMART plsc_2 100 222 IPR002123 GO:0016746
Ssu3g2811 382 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
Ssu3g2811 382 CDD LPLAT_LCLAT1-like 76 265 - -
Ssu3g2811 382 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 373 - -
Ssu3g2811 382 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 373 - -
Ssu3g2811 382 Pfam Acyltransferase C-terminus 254 322 IPR032098 -
Ssu3g2811 382 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 33 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2811 Ssu-Chr3 82433813 82435640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2811 14 365 Miscellaneous Gene Families AT1G75020 62.323 3.62e-161 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2811 K13513 - gmx:100814885 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2811 3 82433813 82435640 Ssu3g2811 3 82433813 82435640 ECH