Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2806 ATGCCTATGGAGGCTTTCTCCGTACAGTCACTGACCGCAACCACCATTCCCTCCTCTTTGTCACGTAGAGGGGCCACCGAGAAACCTTCTGCCTCCCATGTTAACCTTTCCCATTTCATTAGGTACCCCTGTACCACAAGAACCACAAAACACAAAATCCGTGGCACCACAGCTCAAGCTTCAGGTTCAACAAAATCTAGTACTGGTACTGCTGAGGGGATTCCTGAGAAAACAGACTCCAAGGATGACAACTTAGTATTTGTTGCGGGCGCTACTGGTAGAGTTGGTTCACGGACAGTGAGggagcttataaagcttggatTTAGAGTCAGAGCCGGAGTGCGGAGTGCTCAGAGGGCTGATGCATTAGTTCAGAGTGTTGAACAATTGAAGCTTGACGGTACAAGTGGGGGGAGACAAGCCCAGCTGTAG 432 0.4792 MPMEAFSVQSLTATTIPSSLSRRGATEKPSASHVNLSHFIRYPCTTRTTKHKIRGTTAQASGSTKSSTGTAEGIPEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQRADALVQSVEQLKLDGTSGGRQAQL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2806 143 MobiDBLite consensus disorder prediction 47 81 - -
Ssu3g2806 143 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 83 124 IPR036291 -
Ssu3g2806 143 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 3 136 IPR044719 -
Ssu3g2806 143 MobiDBLite consensus disorder prediction 47 74 - -
Ssu3g2806 143 Pfam NmrA-like family 86 121 IPR008030 -
Ssu3g2806 143 Gene3D - 80 138 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2806 - - gmx:100779056 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2806 3 82364639 82365692 Ssu3g2806 3 82364639 82365692 ECH