Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2803 ATGGATGATACGGCAACACCTTCAACTGCTTTGGCCTACCTTGATCCTTCCTACTGGGATGAGAGGTTCTCGAAGGAGGAGCAATATGAGTGGTTCAAGGATTATTCCCATTTTCGGCACTTGATTCAACCGCATCTCACGCCTCAATCCTCTGTTCTGGAGCTTGGATGTGGAAACTCACAAATGTGTGAAGAGTTGCATAGGGATGGGACAACTAACATAACTTGCATTGACCTTTCACCTGTTGCAGTTCACAACATGCAGAAACGGTTACTCTCCCGGGGATTCAAAGACATAAAAGTGCTGCAAGCTGATATGCTAGAGCTACCTTTTGAGGATGAGTGTTTTGATTTGGTTATTGAGAAAGGAACTATGGATGTATTGTTCGTGGACAGTGGTGACCCATGGAATCCAAGGCCGGAAACTATATCCAAGGTCATGGCCACGTTGAAAGGTGTTCACAGGGTCTTGAAAGCTGGTGGCACATTTATCTCAGTAACCTTTGGCCAGCCACATTTCAGGCGCCCTATATTTAATGCACCAGATTTCAGCTGGTCTGTTGAGTGGACTACTTTTGGTGAAACCTTTCACTATTTTGTCTATGTTCTGAAGAAGGGACAGAGGTCGTCATATGATGGTATACCACCTGTTAAGAGGTTTGAAGCACCGCCTATTAATCTACTTCATGAAGAGTTAGAAAGTGAAGATTTTGCTTTTCGAATCAATGTTGACGAGTTGAACTATTAG 747 0.4378 MDDTATPSTALAYLDPSYWDERFSKEEQYEWFKDYSHFRHLIQPHLTPQSSVLELGCGNSQMCEELHRDGTTNITCIDLSPVAVHNMQKRLLSRGFKDIKVLQADMLELPFEDECFDLVIEKGTMDVLFVDSGDPWNPRPETISKVMATLKGVHRVLKAGGTFISVTFGQPHFRRPIFNAPDFSWSVEWTTFGETFHYFVYVLKKGQRSSYDGIPPVKRFEAPPINLLHEELESEDFAFRINVDELNY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2803 248 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 7 242 - -
Ssu3g2803 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 200 IPR029063 -
Ssu3g2803 248 PANTHER EEF1A LYSINE METHYLTRANSFERASE 4 7 242 - -
Ssu3g2803 248 Gene3D Vaccinia Virus protein VP39 11 215 IPR029063 -
Ssu3g2803 248 Pfam Methyltransferase domain 50 168 IPR025714 -
Ssu3g2803 248 CDD AdoMet_MTases 52 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2803 Ssu-Chr3 82345455 82347429 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2803 K22857 - gmx:100807535 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2803 3 82345455 82347429 Ssu3g2803 3 82345455 82347429 ECH