Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2798 ATGCATATGGGAACTTGTGCATCAATTCAATACGCAAGCAAAGGTGGAAACCATAGTTGGCAATCCACGGTGAACATAGTTCACTTAGGCGGAAAGCTGCAACAATTGAAGGAGCCAATTAAAGCATGGCATGTCCTGTCTCAGAACCCAAACTGCTTCATCTGCTGCTCAGAATCCATGTATGTTGGGTCACCAATTCCTCCTGTGGCTCCAACTGAAGAGCTTCAATTGGGTCATATATACTTCCTTGTCCCACTTCCCAAATCCCGCGTGCCACTTTCTCTTCAGGACTTGGGCGCACTAGCCATCAAGGCTAATGCAGCTCTTGCTCCTTCAAAACCTATCTTAAAAGccaattcacaaaaaaaattccgTACGCACCCAACTCTTTCAAGCGTTTCTCTGGGACATTCccattaa 420 0.4333 MHMGTCASIQYASKGGNHSWQSTVNIVHLGGKLQQLKEPIKAWHVLSQNPNCFICCSESMYVGSPIPPVAPTEELQLGHIYFLVPLPKSRVPLSLQDLGALAIKANAALAPSKPILKANSQKKFRTHPTLSSVSLGHSH 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2798 139 Pfam PADRE domain 3 117 IPR025322 -
Ssu3g2798 139 PANTHER DUF4228 DOMAIN PROTEIN 3 124 - -
Ssu3g2798 139 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 3 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2798 Ssu-Chr3 82274368 82274787 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2798 - - gmx:100789718 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2798 3 82274368 82274787 Ssu3g2798 3 82274368 82274787 ECH