Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2796 aTGAAATACAGTGAGATATCCCACTTCAGTCACCCGCAACACAAGCTGAGGTTCGAGTACTCAGAATTCCCCTTCAAATGTGACGGCTGCAAGGAAGTTGGGATAGGCTCGCGTTACAAATGCCCCACTTGCGACTACGACCTTCACATGCACTGTGCCATGATAACCTCCCCCACCTTGTTCCACCCATTCTACACCAAGTGCACCTTCCAGTTCATGTCGTCACCAGCAGGCGACACGCCCCGTTACTGCAACGCGTGCGAGAAGGACGTGAGTGGCTTCGTGTACCACTGCAAGTCGTGCGGGTTCGACCTCCACCCGTGTTGCGCCAAGCTACCGATGGTCCTTGACGACGGCGAGGTGAAGCTGTACTTGTACAGGAAAGTGAGCTCGGCCTGTCACCGTTGCGGCAGAAAAGGGCGCAGCTGGAGCTACAGGTCCAAGTGCAAGAGCTACAATCTGCACGTGGCGTGTGTGAGGGACATGGTGGTGGAGAATTGGCACGAGGTGTACGTTAAGGGAAGGAAGGTGGATGGCAACGTTCCCGGTCTCAGGAACACGCTGTACACTCCCCATAACAGCAGGAGAAGCAAGGGGAAGGTGAAGAAGTGCTGTGAGATTGCTGCTTTGGCTGTGCAGTTTGTGATATCGGCGGTGCTGGGAGATCCAACGGCTCTCATTGCCGGCATTGTGGGGTCATTCATGTCGTGA 711 0.5513 MKYSEISHFSHPQHKLRFEYSEFPFKCDGCKEVGIGSRYKCPTCDYDLHMHCAMITSPTLFHPFYTKCTFQFMSSPAGDTPRYCNACEKDVSGFVYHCKSCGFDLHPCCAKLPMVLDDGEVKLYLYRKVSSACHRCGRKGRSWSYRSKCKSYNLHVACVRDMVVENWHEVYVKGRKVDGNVPGLRNTLYTPHNSRRSKGKVKKCCEIAALAVQFVISAVLGDPTALIAGIVGSFMS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2796 236 SUPERFAMILY Cysteine-rich domain 59 116 IPR046349 -
Ssu3g2796 236 Pfam C1 domain 76 110 IPR004146 -
Ssu3g2796 236 Pfam C1 domain 9 53 IPR004146 -
Ssu3g2796 236 Gene3D - 17 65 IPR043145 -
Ssu3g2796 236 SUPERFAMILY Cysteine-rich domain 4 57 IPR046349 -
Ssu3g2796 236 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 13 68 IPR002219 -
Ssu3g2796 236 Gene3D - 78 112 - -
Ssu3g2796 236 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 2 236 - -
Ssu3g2796 236 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2796 Ssu-Chr3 82220984 82221694 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2796 - - gmx:100790779 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2796 3 82220984 82221694 Ssu3g2796 3 82220984 82221694 ECH