Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2791 ATGCCGGAGGGGTACACTGTGAAGGTGGAGGAGGCAAGGCCCGCAACTCATGAAATGCCATCAGCAGGTCCTGTCTACAGGTGCATTTATGCCAAAGATGGTTTGACGGAGTTGCCTTCTCATTTTGAATCTCCATGGGACTTCTTCAGGGACACTACAACGAGGTGCCCCAACAACCCAATGCTGGGTCGGCGTCAAAAAACCGACTCACAGGTGGGTCCCTATGAATGGATCACATATCAGGAGGCTTATGATGCTGCCATCCGAATGGGTTCCGCCATGAGGAGCCGTGGTGTCAATCCTGGAGATCGTTGTGCCATATATGGCTCCAACTGCCCCGAATGGATCATTGCAATGGAGGCTTGCAATAGCTATGCAGTAACATATGTCCCATTATATGACACCCTGGGTCCTAACGCCGTGGAGTTCATCATATACCATGCTGAAGTTTCGATAGCATTTGTACAGGAGAACAAGATTCCTTCTGTTTTGTCATGCCTTGATCGGTGTTCAAGTCTTAAAACTATTGTGAGTTTTGGTAATGTTTCATCCACACAGAAGAAGGAGGCTGGAGAACTTGGTGCATCTTGCTTCTTGTGGGAAGAGTTTCTCCAGTTGGGAAATTTGGATTTAGACCTACCATTGAAAAAGAAGACTAACATATGCACTATCATGTACACAAGTGGAACAACAGGCGAACCCAAAGGCGTTATTATCAAGAATGAGGCTTTCATGGCTCAAGTGTTGTCTATTGaccaaatactttttttaactgACAGAGTGGGAACAGAAGACGACGTGTACTTCTCTTTCCTTCCTCTTGCTCATGTATACGACCAGATAATGGAGACCTATTGCATCTACAAGGGCTCCTCAATTGGATTTTGGCAAGGCGATGTCAGGTTCTTAATGGAAGATGTTCAGGCACTGAAACCAACTATATTTTGTGGTGTTCCTAGAGTTTATGATCGTGCTTATGCTGGTATCAATAGCAAAATTTCATCTGGAGGAGCACTGCGAAGTACATTGTTCCAATATGCATATAACTATAAGTTGGGATATCTGGAGAAGGGTCTTCCTCAAGACAAAGCAGCACCTCTGTTTGATAGGCTTGTGTTTGATAAGATAAAACAAGCATTAGGTGGACGGGTTCGTCTCCTGTTATCAGGAGCTGCTCCTTTGTCTAGGCACGTGGAGGAGTTTTTGAGGGTCACTTTTGGAGCTACTATGTCTCAAGGATATGGTCTTACTGAAAGTTGTGGTGGATGTTTCACTGCAATAAGCAATGTGTTTTCTATGATGGGAACAATTGGAGTCCCTATGACATCCATTGAGGCCAGGCTTGAATCTGTGCCAGAGATGGGATATGATGCACTCTCCAGTGAAGCCCGTGGAGAAATTTGCCTTAGAGGGAATACCTTGTTCTCTGGTTACCACAAGCGTCAAGATCTTACTGAAGAGGTTCTGGTTGATGGTTGGTTTCATACAGGTGACATTGGAGAATGGCAGCCAAATGGAGCCATGaaaattattgatagaaaaAAGAACATCTTTAAATTGTCTCAAGGAGAATATGTTGCCGTagagaatattgaaaacaagTATTTGCAGTGCTCCCTTATAACAACAATTTGGGTTTATGGAAACAGTTTTGAATCTTTCTTGGTGGCAGTAGTGGTCCCTGAAAGAAAGGCTCTTGAGGATTGGGCAGTGAAGCATAATCCTACAGatgatttcaaatctttatgtGGAAATCTTAAGGCAAGAAAATACATTTTGGATGAGCTCAACAGCACTGGTCAGAAACACCAACTTAGAGGTTTTGAACTGCTAAAAGCAGTTCATCTGGAACCAATTCCCTTTGACATGGAGAGAGATCTGATAACTCCAACGTTCAAGTTGAAGAGACCGCAATTGCTCAAGCACTATAAGGATTGTATTGATCAACTATACAAGGAAGCGAAGGCAACGATGGTGTGA 1980 0.4263 MPEGYTVKVEEARPATHEMPSAGPVYRCIYAKDGLTELPSHFESPWDFFRDTTTRCPNNPMLGRRQKTDSQVGPYEWITYQEAYDAAIRMGSAMRSRGVNPGDRCAIYGSNCPEWIIAMEACNSYAVTYVPLYDTLGPNAVEFIIYHAEVSIAFVQENKIPSVLSCLDRCSSLKTIVSFGNVSSTQKKEAGELGASCFLWEEFLQLGNLDLDLPLKKKTNICTIMYTSGTTGEPKGVIIKNEAFMAQVLSIDQILFLTDRVGTEDDVYFSFLPLAHVYDQIMETYCIYKGSSIGFWQGDVRFLMEDVQALKPTIFCGVPRVYDRAYAGINSKISSGGALRSTLFQYAYNYKLGYLEKGLPQDKAAPLFDRLVFDKIKQALGGRVRLLLSGAAPLSRHVEEFLRVTFGATMSQGYGLTESCGGCFTAISNVFSMMGTIGVPMTSIEARLESVPEMGYDALSSEARGEICLRGNTLFSGYHKRQDLTEEVLVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCSLITTIWVYGNSFESFLVAVVVPERKALEDWAVKHNPTDDFKSLCGNLKARKYILDELNSTGQKHQLRGFELLKAVHLEPIPFDMERDLITPTFKLKRPQLLKHYKDCIDQLYKEAKATMV 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2791 659 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Ssu3g2791 659 CDD LC-FACS_euk 73 652 IPR045311 GO:0004467|GO:0006631
Ssu3g2791 659 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 2 655 - -
Ssu3g2791 659 SUPERFAMILY Acetyl-CoA synthetase-like 39 653 - -
Ssu3g2791 659 Gene3D - 30 513 IPR042099 -
Ssu3g2791 659 Pfam AMP-binding enzyme 72 521 IPR000873 -
Ssu3g2791 659 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2791 Ssu-Chr3 82190128 82197983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2791 5 659 Acyl Lipid Metabolism Gene Families AT1G64400 54.863 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2791 K01897 - gmx:100790068 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2791 3 82190128 82197983 Ssu3g2791 3 82190128 82197983 ECH