Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2787 ATGGAGTTCGTTCCTGAAGAAGGCAAGCACCCTCACGAGGATTGCTCCACTTTGATTTTGCCTGCTCTGTCGATTGGTAATGTGGGGCAGCTAGTTGCAGATCTTTTGATTTCATCAGTGGGTTCAGAGAGAGTTGGGTATTTGGATGATCCTAACGTTTTGCCCTGTGTTGGCAATGATGCTTATGGACCCTTTCCTCAAGGAGACCTTGCTCTTCCTCTTGAAGCCTATGATTCCCCTTCTAATGCTCTCACTATCATCCAACAGAGATCGCCAGTGGTTAAGGGCATGATGGTTGAGTTCGCAAAAAACATGGCTGACTTTGTTGCTGATAGCGGAAAGAAGCATATTATTGTTCTCTCCAGCTTAGATTTTGGAAAGTGGCAAAAAGTTGACATGTCAAGTGGTTTGCAGATCTATTACCTTTCTAGTGCCAACAGCAATGGAACAGATGAAAACTGTGAACAGCTTGGATGGAAGAAACTTCAGGAGTATGACCCTTCTCAAAAGCATTGGAAATATCTTAGTGATTTAGCTGAAGGAAATGCTACTCTGGAAGATATTATTTCTGTAGAAGATGagctagaagaagaaaattattatgCTAGCTTGCCTTTTGCtgcacttttttcttttctcaagGCTAAAGGTTTGAAGGTCACCTGCTTGCTATGTTATTGCTCAGAAGGAGACAACATATCGGATGCTTTTCAATTAGCCGATGCAGTATGTAAACTTCTACAGCTGAGTCACCCTACTACTGGAATTGAAGGTGGCAAATGGCGAGTTCCACTTTCTTGGATGACTGTGTATGGACCACCCCCAGATCTGTCCATCTTCTAA 843 0.4116 MEFVPEEGKHPHEDCSTLILPALSIGNVGQLVADLLISSVGSERVGYLDDPNVLPCVGNDAYGPFPQGDLALPLEAYDSPSNALTIIQQRSPVVKGMMVEFAKNMADFVADSGKKHIIVLSSLDFGKWQKVDMSSGLQIYYLSSANSNGTDENCEQLGWKKLQEYDPSQKHWKYLSDLAEGNATLEDIISVEDELEEENYYASLPFAALFSFLKAKGLKVTCLLCYCSEGDNISDAFQLADAVCKLLQLSHPTTGIEGGKWRVPLSWMTVYGPPPDLSIF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2787 280 PANTHER PROTEASOME ASSEMBLY CHAPERONE 2 1 280 IPR016562 -
Ssu3g2787 280 Gene3D - 14 173 IPR038389 -
Ssu3g2787 280 Gene3D - 190 280 IPR038389 -
Ssu3g2787 280 PIRSF UCP010044 14 280 IPR016562 -
Ssu3g2787 280 PANTHER PROTEASOME ASSEMBLY CHAPERONE 2 1 280 - -
Ssu3g2787 280 Pfam PAC2 family 18 247 IPR019151 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2787 K11876 - gmx:100812348 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2787 3 82150588 82154038 Ssu3g2787 3 82150588 82154038 ECH