Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2785 ATGGCTTTGCTTCTGAAAAAACTACGTCCTGGTGTACCTTCAGTtcatgatgatggtggtgattACAGCTATGAGTACTCTTTTGCTGAGGAATACAAAGGCCCTCCTCTCAGTTATTCCATCCCAGAAGCACCTCCTTTCAACCATGACCAAATCCCACTTGCCCAAGTTGCTCATTCTCCCCCTCATCACTTAACACTCCCAGTTGTCCAACCCTTTAGAAAAACCAATGCAGAATTGGCTTCAAGTTCTGCTTCTGTTTCTTCTGAGACACTTTCATGCAGAGAAGAGGATGGTGACAATGACCATCTTAGTCCAAAACATGTTAAACGGCCTTCCGTGGTGACTTTTCGTCATCCTGAGACAAATGACACGGTGGATGGTGAAGAGTTTGTTGAATCTGTTGGTGGGGAAAGTAATAGCAATAGTAATAGTAGCCGTGTGAGGCCGCATGCTGTGAGAGGTGGGAAGAAAGGCTCGTGCTATCGGTGCCTTAAAGGGAATCGTCTCACCGAGAGGGTGGTTTGCATTGTTTGCAGTGCCAAGTATTGCCGCAACTGTGTGGTTAGAGCAATGGGGTCCATGCCTGAAGGCAGAAAATGTGTCACTTGCATTGGTTATAGAATTGATGAGAACAAGCGGGGGAAGCTTGGCAAATCTTCTCGGATGCTCAAGCACTTGTTGTCTGAGTGGGAACTGAAACAAATCATGAAGGATGAAATGTTTTGTGAAGCAAATCAAATACCAGCCGAACATGTTCGTGTGAATGGAGAACCTCTTGATTGGGATCAACTCATGCTGCTTTTGACCTGTTCAAACCCACCAAAAGGATTGAAACCGGGTTTCTATTGGTATGATAAGGCTTCTGGATTTTGGGGAACGGAAGGTCAACGGCCAAGTCAAATTATTAGCCCACAGTTGGAGGTTGGGGGTCACTTGCAGAGAAATGCAAGCCATGGAGAGACAAATGTAACTATAAATGGTCGAGAGATTACCAAAGAAGAGCTATGGCTACTGAAGTGGGCACGAGTGCCCTGTGAAGGAACAACTGACTTTTGGGTGAGCCATGATGGATCATACATTGAAGTGGGACAGAAGAATATCAAGGGGCGTATATGGGAGAAGTCTACGGTGAAGCTAGCTGCTCTAATTCTGTCACTGCCAGTTCCTTCAAAATCTTTGAATCCTGTGGGCGAAGGAGAAAATGGAATTAGCGAGCACAACCTTCAACAGAATACGCTTCACAAATTTTTACTTGTTGGTTCTGACAAGTCTGGAACATGTACCATATTTAAACAGGCCAAGCTTTTGTATAATGTTCCTTTCTCTGAAAACGAGCGCCAAAACATCAAGCTGGTAATTCAAAGCAATTTGTATAGGTACCTTGGTATACTGCTGGAGGCGCGAGAAATTTTTGAAGAGAGTTTGTATCAAAAAAGTAATGGACGACATGTTGATGAATCAACTTCTTCTgGGATTAGTGGGGAAATTATTGACACGACAACCTATTCCATTGGCCAAAGACTGAAAGCTTTCTCAGAATGGCTACTCAAATATATGGTGTCAGGTAACTTGGAAGCAATATTTCCAGCTGCTGCTCGTGAATATGCGCCACTGGTGGAGGAACTGTGGAGGGATGCAGCCATTCAGGCCACATACAACAggagaaatgaaataaaaaatctacCAAGAAGTGCGAGCTATTTCTAG 1710 0.4327 MALLLKKLRPGVPSVHDDGGDYSYEYSFAEEYKGPPLSYSIPEAPPFNHDQIPLAQVAHSPPHHLTLPVVQPFRKTNAELASSSASVSSETLSCREEDGDNDHLSPKHVKRPSVVTFRHPETNDTVDGEEFVESVGGESNSNSNSSRVRPHAVRGGKKGSCYRCLKGNRLTERVVCIVCSAKYCRNCVVRAMGSMPEGRKCVTCIGYRIDENKRGKLGKSSRMLKHLLSEWELKQIMKDEMFCEANQIPAEHVRVNGEPLDWDQLMLLLTCSNPPKGLKPGFYWYDKASGFWGTEGQRPSQIISPQLEVGGHLQRNASHGETNVTINGREITKEELWLLKWARVPCEGTTDFWVSHDGSYIEVGQKNIKGRIWEKSTVKLAALILSLPVPSKSLNPVGEGENGISEHNLQQNTLHKFLLVGSDKSGTCTIFKQAKLLYNVPFSENERQNIKLVIQSNLYRYLGILLEAREIFEESLYQKSNGRHVDESTSSGISGEIIDTTTYSIGQRLKAFSEWLLKYMVSGNLEAIFPAAAREYAPLVEELWRDAAIQATYNRRNEIKNLPRSASYF 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2785 569 MobiDBLite consensus disorder prediction 81 158 - -
Ssu3g2785 569 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 100 569 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Ssu3g2785 569 MobiDBLite consensus disorder prediction 135 149 - -
Ssu3g2785 569 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 100 569 - -
Ssu3g2785 569 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 15 81 - -
Ssu3g2785 569 SUPERFAMILY FYVE/PHD zinc finger 148 207 IPR011011 -
Ssu3g2785 569 ProSiteProfiles G-alpha domain profile. 413 569 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Ssu3g2785 569 Gene3D - 443 569 IPR011025 GO:0007165
Ssu3g2785 569 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 15 81 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Ssu3g2785 569 MobiDBLite consensus disorder prediction 93 126 - -
Ssu3g2785 569 Pfam G-protein alpha subunit 406 569 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Ssu3g2785 569 SUPERFAMILY Transducin (alpha subunit), insertion domain 442 569 IPR011025 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2785 Ssu-Chr3 82126094 82129294 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2785 - - gmx:100791124 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2785 3 82126094 82129294 Ssu3g2785 3 82126094 82129294 ECH