Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2784 ATGGACATCTTGTACGCTGAGGGGATAACCTTATCCAATGGCCTTTCTTCTATGGAATTTTCATTTACTGTGTCAGGTCATGAGGACTCATTGGACCCTATGTATCAACATGATCCTTCACTCAGGTACCAGCTCATCAGAATACATCCAAAAAGCCTAGGAGAAAACTGCAAGTGGTTGGACATGTTTGAAGACACTGATGTAGTCTTATTCTCTGTGGCCTTAACTGACTATGACGAGTACACAGTAAACAGTAATGGAGTTGCTACCAACAAAATTTTAGCAGCTAAACATCTCTTTGAAAACATCATCACTCACAGAGTCTTCAACAACAAgaaattccttttaattttgaccaagTTTGATCTGCTAGAGGAAAAGATGGAACGGGCACCTCTAACACAATGTGAATGGTTTTGTGACTTCGATCCAGTTATTAGCCACAATCACAAAACGGCTAGGATTAGTAAACATAGCAATCATCCTCCATTGGCTCAACGTGCTTTTCAATACATTGCTATGAAGTTTAAGAGATTGTTCAATTCTCTTACTGGCCGAAAGCTGTTTGTTTCACTAGTTACTGGGTTGGAACCTGGTACTGTTGATGAAGCTCTTAGATATGCCAGAGAGGTTATGGTGTGGGAAAAATGGGACCCCTCTTTGAGAAATGAGAAGTCTGAGATAACATCCACAACCATTGAGCCAAgctcttattaa 717 0.3877 MDILYAEGITLSNGLSSMEFSFTVSGHEDSLDPMYQHDPSLRYQLIRIHPKSLGENCKWLDMFEDTDVVLFSVALTDYDEYTVNSNGVATNKILAAKHLFENIITHRVFNNKKFLLILTKFDLLEEKMERAPLTQCEWFCDFDPVISHNHKTARISKHSNHPPLAQRAFQYIAMKFKRLFNSLTGRKLFVSLVTGLEPGTVDEALRYAREVMVWEKWDPSLRNEKSEITSTTIEPSSY 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2784 238 ProSiteProfiles G-alpha domain profile. 1 227 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Ssu3g2784 238 Gene3D - 1 220 IPR027417 -
Ssu3g2784 238 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 1 236 - -
Ssu3g2784 238 Pfam G-protein alpha subunit 2 211 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Ssu3g2784 238 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 1 236 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Ssu3g2784 238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 216 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2784 Ssu-Chr3 82124425 82125643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2784 - - gmx:100791124 418.313