Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2778 atgTCGTACGACGAGGTAGAGATCGAGGACATGGAGTGGAACGAGGAGTTGCAGGCGTACACGTACCCGTGCCCGTGCGGGGACCTCTTCCAGATCACCAAGGAAGACCTTAAACTCGGCGAAGAGATCGCACGATGCCCTAGCTGCTCCCTCTACATCACCGTCATCTACAACATCGAAGATTTCCTCGCCGATTCCGATCAGAATCGACGAAACAAGGGCCTCGAGCCCTCCAACCAGCAACGCATCACCGTTGCTTGA 261 0.5517 MSYDEVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNIEDFLADSDQNRRNKGLEPSNQQRITVA 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2778 86 SUPERFAMILY CSL zinc finger 2 72 IPR036671 -
Ssu3g2778 86 PANTHER DPH3 HOMOLOG 2 72 - -
Ssu3g2778 86 PANTHER DPH3 HOMOLOG-RELATED 2 72 IPR044248 GO:0017183|GO:0046872
Ssu3g2778 86 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 2 58 IPR007872 -
Ssu3g2778 86 Pfam CSL zinc finger 4 58 IPR007872 -
Ssu3g2778 86 Gene3D DPH Zinc finger 1 84 IPR036671 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2778 K15455 - gmx:100500529 169.474