Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2771 ATGAACACGAACAACGGCATGATGATGGCCTCCAAGTCCAATTCCATAACACTTGGAGTGGGTTCTTTCACAACTTGCCCATTCTCTAGAACTAGAACCTGCTGCATTCACGTCCTTGCAAGTCCAAATGCAAAATCCAGAGGCGCTTTTTCTCTCAGTCTCAGCCTGACCAAGAGGAGGAGCTTATGTATTCTTTCTAGTCCCACCGAGACAGCTCTCAGACACCTCAATACACCAGTTTCAGCTCTTAATTCAGGTTTAGAAGCATCAATTACAGATTCCAATGATATTTCAGCCATCTTAACAAATGCCAAAATAGTAGTAGATTCCGAAGATGAAAATAAGACACAACTAAGAGTTGACTTGACTGGTGATCAAACACAAAAGGTATTCGATAGGATCCTAACAAACTTAGGTCGTACTGCCCCACCAGTTCCCGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAGGACTTCCTTGTACAGATGCTTGGGGAAGAACGTGTCACCAAGTTTGCAATACAAGAAATACTCAACTCTACCATGGCTGATTATGCAAAAAAGGCAAGTGATTTTTACCACTTCATATGTAGCTTTCATGGATATACACTTATTTCCACATGTGATGACCCAATACCAGGAAAACTTGGATGTAAAGGACCGGAAGATAAGCACTACCCAAACGGCAGAACAACTGAAAAAATCATTCATGCCAGGAAATGA 735 0.4163 MNTNNGMMMASKSNSITLGVGSFTTCPFSRTRTCCIHVLASPNAKSRGAFSLSLSLTKRRSLCILSSPTETALRHLNTPVSALNSGLEASITDSNDISAILTNAKIVVDSEDENKTQLRVDLTGDQTQKVFDRILTNLGRTAPPVPGFRMQKGGKSSKIPKDFLVQMLGEERVTKFAIQEILNSTMADYAKKASDFYHFICSFHGYTLISTCDDPIPGKLGCKGPEDKHYPNGRTTEKIIHARK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2771 244 Gene3D - 106 196 IPR036611 GO:0006457|GO:0015031
Ssu3g2771 244 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 7 192 IPR005215 GO:0015031
Ssu3g2771 244 PANTHER OS01G0894700 PROTEIN 7 192 - -
Ssu3g2771 244 Pfam Bacterial trigger factor protein (TF) 106 193 IPR008881 GO:0006457|GO:0015031
Ssu3g2771 244 SUPERFAMILY Trigger factor ribosome-binding domain 106 194 IPR036611 GO:0006457|GO:0015031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2771 - - var:108339891 296.204