Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2759 ATGCGGCAATTGGCGGGAACCAACTGTCAATTCAGATACCCTTTGTGTCGAATTCGCCAATTACGAAAGATTCGCGTGGAAAGATTCAGCATCGGAATCTTTGGAAAGAAAAGGGGGGCATCAATTTCAATGGCTAACCCTTCTGGGAATCACGAAGAGCAGACAACCCATGTTGCGTCGTCGTTCAACGGGAATTTGGCTGCCGAGACCTCACCCACCGCGCTCGCCATGAATCACAACCCTGGCATCGCCCTCGACTGGACCCCCCAAGAACAACATATTCTCGAAGAAGGGCTCTCTCTGTTTGCGTATGAACCTAACCTCACACGCTATGCAAAGATAGCACTAAATCTAAATAACAAGACAGTCCGGGATGTAGCACTGAGAGTCAGGTGGATGAATaaaaaagaaaattgcaaGAGAAGGAAGGATGAACATACAAGgaaaagtaaagataaaaagGAAAAGGTTTCCGATCCTGCAGCAAGGTCATCTCACTTTACTGCTCAACCCAATGTTTCCCCATATGCTCCTGCAATGATGATGATGGACAATGATGACGGCATCTCTCATAAAGCTATTGGAGGCCCCACAGGTGAGCTCTTAGAGCAAAATGTATGGACCATGAATAAAATCTCTACCAATCTTGCTGCTCTTCAGTTTCAGGATAACATCAAACTTTTCATCCAAACGAGAGACATCATCATCAAAGTTTTGAATGACATGAATGACATGCCAGAGGTAATGGAGCAAATGCCACCACTTCCTTTTAGGATCAATGAAACGATATTCAACTCCATACTTCCAAAAACAAATCACCAGATGCAATAA 831 0.432 MRQLAGTNCQFRYPLCRIRQLRKIRVERFSIGIFGKKRGASISMANPSGNHEEQTTHVASSFNGNLAAETSPTALAMNHNPGIALDWTPQEQHILEEGLSLFAYEPNLTRYAKIALNLNNKTVRDVALRVRWMNKKENCKRRKDEHTRKSKDKKEKVSDPAARSSHFTAQPNVSPYAPAMMMMDNDDGISHKAIGGPTGELLEQNVWTMNKISTNLAALQFQDNIKLFIQTRDIIIKVLNDMNDMPEVMEQMPPLPFRINETIFNSILPKTNHQMQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2759 276 Pfam Protein of unknown function (DUF3755) 219 251 IPR022228 -
Ssu3g2759 276 Gene3D - 87 159 - -
Ssu3g2759 276 Coils Coil 136 156 - -
Ssu3g2759 276 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 57 275 - -
Ssu3g2759 276 MobiDBLite consensus disorder prediction 138 173 - -
Ssu3g2759 276 PANTHER BNAC03G35350D PROTEIN 57 275 - -
Ssu3g2759 276 MobiDBLite consensus disorder prediction 138 161 - -
Ssu3g2759 276 CDD SANT 87 136 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2759 Ssu-Chr3 81882450 81887632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2759 - - gmx:100775443 387.111